Updated on 2026/07/17

写真a

 
YOKOTA RIO
 
Organization
Institute of Integrated Research Supercomputing Research Center Professor
Title
Professor
External link

Degree

  • Ph.D. (Engineering) ( Keio University )

Research Interests

  • Numerical Analysis

  • Deep Learning

  • High Performance Computing

  • GPU

Research Areas

  • Manufacturing Technology (Mechanical Engineering, Electrical and Electronic Engineering, Chemical Engineering) / Fluid engineering

  • Informatics / Intelligent informatics

  • Informatics / Mathematical informatics

  • Informatics / Computational science

  • Informatics / High performance computing

Education

  • Keio University   Graduate School of Science and Technology   School of Science for Open and Environmental Systems (PhD)

    2005.4 - 2009.3

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  • Keio University   Graduate School of Science and Technology   School of Science for Open and Environmental Systems (Masters)

    2003.4 - 2005.3

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    Country: Japan

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  • Keio University   Faculty of Science and Technology   Department of Mechanical Engineering

    1997.4 - 2003.3

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    Country: Japan

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Research History

  • RIKEN   Center for Computational Science, AI for Science Platform Division, AI for Science Foundation Model Research Team   Team Principal

    2025.4

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  • Institute of Science Tokyo   Institute of Integrated Research, Supercomputing Research Center   Professor

    2024.10

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  • National Institute of Informatics   Research and Development Center for Large Language Models   Scientific Director

    2024.4

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  • Tokyo Institute of Technology   Global Scientific Information and Computing Center   Professor

    2023.1 - 2024.9

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  • Tokyo Institute of Technology   Global Scientific Information and Computing Center   Associate Professor

    2015.4 - 2022.12

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  • King Abdullah University of Science and Technology   Applied Mathematics and Computer Science   Research Scientist

    2011.9 - 2015.3

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  • Boston University   Department of Mechanical Engineering   Post-doctoral Research Associate

    2010.9 - 2011.8

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  • University of Bristol   Department of Mathematics   Post-doctoral Research Associate

    2009.2 - 2010.8

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Professional Memberships

  • THE JAPAN SOCIETY FOR INDUSTRIAL AND APPLIED MATHEMATICS

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  • THE JAPAN SOCIETY FOR COMPUTATIONAL ENGINEERING AND SCIENCE

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  • INFORMATION PROCESSING SOCIETY OF JAPAN

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  • Ameriacn Society of Mechanical Engineers

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  • Japan Society of Mechanical Engineers

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  • Society for Industrial and Applied Mathematics

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  • Association for Computing Machinery

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  • THE JAPAN SOCIETY OF MECHANICAL ENGINEERS

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  • Association for Computing Machinery

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  • Institute of Electrical and Electronics Engineers

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  • THE JAPANESE SOCIETY FOR ARTIFICIAL INTELLIGENCE

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Committee Memberships

  • IEEE International Conference on Cluster Computing (IEEE CLUSTER 2025)   track co-chair  

    2025   

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    Committee type:Academic society

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  • International Conference on Machine Learning (ICML 2025)   reviewer  

    2025   

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    Committee type:Academic society

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  • ISC High Performance (ISC 2025)   program committee  

    2025   

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    Committee type:Academic society

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  • Platform for Advanced Scientific Computing (PASC 2025)   domain co-chair  

    2025   

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    Committee type:Academic society

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  • 39th IEEE International Parallel and Distributed Processing Symposium, (IPDPS 2025)   program committee, best OSS judge  

    2025   

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    Committee type:Academic society

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  • International Conference on Parallel Architectures and Compilation Techniques (PACT 2025)   publicity chair  

    2025   

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    Committee type:Academic society

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  • The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2025)   proceedings vice-chair, program committee, AI4S committee  

    2025   

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    Committee type:Academic society

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  • Conference on Neural Information Processing Systems (NeurIPS 2025)   reviewer  

    2025   

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    Committee type:Academic society

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  •   SIAM Conference on Linear Algebra (LA24), scientific committee  

    2024   

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  •   ACM International Symposium on High-Performance, Parallel and Distributed Computing (HPDC 2024), program committee  

    2024   

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  •   SC Asia (SCA 2024), program committee  

    2024   

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  •   Platform for Advanced Scientific Computing (PASC 2024), program committee  

    2024   

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2024), poster, ML track, AI4S/TPC WS, LLMs for HPC BoF  

    2024   

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  •   International Conference on Preconditioning Techniques for Scientific and Industrial Applications, (Precond 2024), program committee  

    2024   

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  •   38th IEEE International Parallel and Distributed Processing Symposium, (IPDPS 2024), track co-chair  

    2024   

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  •   ISC High Performance (ISC 2024), posters chair  

    2024   

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  •   The 12th International Conference on Learning Representations (ICLR 2024), reviewer  

    2024   

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  •   The 30th International Conference on Parallel Processing (Euro-Par 2024), program committee  

    2024   

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  •   The IEEE / CVF Computer Vision and Pattern Recognition Conference (CVPR 2024), reviewer  

    2024   

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  •   38th Conference on Neural Information Processing Systems (NeurIPS 2024), reviewer  

    2024   

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  •   The Eleventh International Conference on Learning Representations (ICLR 2023), reviewer  

    2023   

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    Committee type:Academic society

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  •   Platform for Advanced Scientific Computing (PASC 2023), mini symposia and posters com- mittee, program committee  

    2023   

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  •   The 23rd IEEE/ACM international Symposium on Cluster, Cloud and Internet Computing (CCGrid 2023), program committee  

    2023   

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  •   The IEEE / CVF Computer Vision and Pattern Recognition Conference (CVPR 2023), re- viewer  

    2023   

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  •   The 32nd International Conference on Parallel Architectures and Compilation Techniques (PACT 2023), publicity chair Asia  

    2023   

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  •   IEEE International Conference on Cluster Computing (IEEE CLUSTER 2023), publicity chair  

    2023   

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  •   Principles and Practice of Parallel Programming (PPoPP 2023), publicity chair  

    2023   

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  •   37th IEEE International Parallel and Distributed Processing Symposium, (IPDPS 2023), pro- gram committee  

    2023   

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  •   ISC High Performance (ISC 2023), posters deputy chair  

    2023   

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  •   SIAM Conference on Computational Science and Engineering (CSE23), poster judge  

    2023   

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  •   10th International Congress on Industrial and Applied Mathematics (ICIAM 2023), program committee  

    2023   

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2023), posters, workshops, ML tech paper, panelist, best paper  

    2023   

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  •   37th Conference on Neural Information Processing Systems (NeurIPS 2023), reviewer  

    2023   

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  •   Platform for Advanced Scientific Computing (PASC 2023), mini symposia and posters committee, program committee  

    2023   

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  •   37th IEEE International Parallel and Distributed Processing Symposium, (IPDPS 2023), program committee  

    2023   

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  •   The IEEE / CVF Computer Vision and Pattern Recognition Conference (CVPR 2023), reviewer  

    2023   

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  •   IEEE CLUSTER (IEEE CLUSTER 2022), program committee  

    2022   

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    Committee type:Academic society

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  •   ISC High Performance (ISC 2022), poster committee  

    2022   

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    Committee type:Academic society

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  •   The 36th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2022), program committee  

    2022   

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    Committee type:Academic society

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  •   International Conference on High Performance Computing in Asia-Pacific Region (HPC Asia 2022), Applications track co-chair  

    2022   

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    Committee type:Academic society

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  •   European Conference on Computer Vision (ECCV 2022), reviewer  

    2022   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2022), program committee, workshop chair  

    2022   

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    Committee type:Academic society

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  •   49th International Conference on Parallel Processing (ICPP 2022), program committee  

    2022   

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    Committee type:Academic society

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  •   IEEE CLUSTER (IEEE CLUSTER 2021), program committee  

    2021   

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    Committee type:Academic society

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  •   ISC High Performance (ISC 2021), program committee, best paper committee, steering com- mittee  

    2021   

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    Committee type:Academic society

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  •   The 35th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2021), program committee  

    2021   

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    Committee type:Academic society

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  •   International Conference on High Performance Computing in Asia-Pacific Region (HPC Asia 2021), organizing committee  

    2021   

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    Committee type:Academic society

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  •   SIAM Computational Science and Engineering (SIAM CSE 2021), organizing committee  

    2021   

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    Committee type:Academic society

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  •   IEEE International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD 2021), program committee  

    2021   

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    Committee type:Academic society

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  •   48th International Conference on Parallel Processing (ICPP 2021), program committee  

    2021   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2021), program committee  

    2021   

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    Committee type:Academic society

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  •   ISC High Performance (ISC 2021), program committee, best paper committee, steering committee  

    2021   

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  •   SIAM Conference on Parallel Processing for Scientific Computing (SIAM PP 2020), program committee  

    2020   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2020), ML track Chair  

    2020   

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    Committee type:Academic society

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  •   The 26th International Conference on Parallel Processing (Euro-Par 2020), program committee  

    2020   

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    Committee type:Academic society

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  •   International Conference on High Performance Computing in Asia-Pacific Region (HPC Asia 2020), program committee  

    2020   

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    Committee type:Academic society

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  •   48th International Conference on Parallel Processing (ICPP 2019), Applications track chair, Workshop co-organizer  

    2019   

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    Committee type:Academic society

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  •   SIAM Conference on Computational Science and Engineering (SIAM CSE19), organizing com- mittee  

    2019   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2019), program committee  

    2019   

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    Committee type:Academic society

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  •   ISC High Performance (ISC 2019), program committee  

    2019   

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    Committee type:Academic society

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  •   IEEE CLUSTER (IEEE CLUSTER 2019), program committee  

    2019   

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    Committee type:Academic society

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  •   Platform for Advanced Scientific Computing Conference (PASC 2019), program committee  

    2019   

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    Committee type:Academic society

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  •   The 3rd cross-disciplinary Workshop on Computing Systems, Infrastructures, and Program- ming (xSIG 2019), program committee  

    2019   

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    Committee type:Academic society

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  •   IEEE 13th International Symposium on Embedded Multicore/Many-core Systems-on-Chip (MCSoC 2019), ATMG Track Chair  

    2019   

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    Committee type:Academic society

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  •   The 3rd cross-disciplinary Workshop on Computing Systems, Infrastructures, and Programming (xSIG 2019), program committee  

    2019   

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  •   SIAM Conference on Computational Science and Engineering (SIAM CSE 2019), organizing committee  

    2019   

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  •   SIAM Conference on Parallel Processing for Scientific Computing (SIAM PP 2018), organizing committee  

    2018   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2018), proceedings chair  

    2018   

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    Committee type:Academic society

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  •   ISC High Performance (ISC 2018), proceedings chair  

    2018   

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    Committee type:Academic society

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  •   IEEE CLUSTER (IEEE CLUSTER 2018), program committee  

    2018   

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    Committee type:Academic society

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  •   The 32nd IEEE International Parallel & Distributed Processing Symposium (IPDPS 2018), program committee  

    2018   

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    Committee type:Academic society

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  •   18th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2018), program committee  

    2018   

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    Committee type:Academic society

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  •   SC Asia (SCA 2018), program committee  

    2018   

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    Committee type:Academic society

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  •   The 23rd International Conference on Parallel Processing (Euro-Par 2017), program committee  

    2017   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2017), program committee  

    2017   

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    Committee type:Academic society

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  •   Platform for Advanced Scientific Computing Conference (PASC 2017), program committee  

    2017   

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    Committee type:Academic society

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  •   The 31st IEEE International Parallel & Distributed Processing Symposium (IPDPS 2017), program committee  

    2017   

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    Committee type:Academic society

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  •   International Conference on Supercomputing (ICS 2017), program committee  

    2017   

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    Committee type:Academic society

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  •   IEEE CLUSTER (IEEE CLUSTER 2017), program committee  

    2017   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   International Conference on Supercomputing (ICS 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   Platform for Advanced Scientific Computing Conference (PASC 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   ISC High Performance (ISC 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   The 30th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   The 23rd annual IEEE International Conference on High Performance Computing, Data, and Analytics (HiPC 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   28th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   IEEE CLUSTER (IEEE CLUSTER 2016), program committee  

    2016   

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    Committee type:Academic society

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  •   IEEE CLUSTER (IEEE CLUSTER 2015), program committee  

    2015   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2015), program committee  

    2015   

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    Committee type:Academic society

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  •   The 22nd annual IEEE International Conference on High Performance Computing, Data, and Analytics (HiPC 2015), program committee  

    2015   

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    Committee type:Academic society

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  •   15th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2015), program committee  

    2015   

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    Committee type:Academic society

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  •   14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2014), program committee  

    2014   

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    Committee type:Academic society

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  •   The annual IEEE International Conference on High Performance Computing (HiPC 2014), program committee  

    2014   

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    Committee type:Academic society

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  •   The 20th International Conference on Parallel Processing (Euro-Par 2014), program committee  

    2014   

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    Committee type:Academic society

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2014), program committee  

    2014   

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    Committee type:Academic society

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  •   The International Meeting on High-Performance Computing for Computational Science (VEC- PAR 2014), program committee  

    2014   

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    Committee type:Academic society

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  •   The International Meeting on High-Performance Computing for Computational Science (VECPAR 2014), program committee  

    2014   

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  •   The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2013), program committee  

    2013   

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  •   The 28th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2013), program committee  

    2013   

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  •   18th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPoPP 2013), program committee  

    2013   

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  •   The annual IEEE International Conference on High Performance Computing (HiPC 2013), program committee  

    2013   

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  •   15th International Symposium on Symbolic and Numeric Algorithms for Scientific Computing (SYNASC 2013), program committee  

    2013   

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  •   The Third International Workshop on Frontier of GPU Computing, program committee  

    2012   

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  •   The 12th International Symposium on Parallel and Distributed Computing (ISPDC 2012), program committee  

    2012   

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Papers

  • Loss and Optimizer as Two Essential Mechanisms Behind Knowledge Distillation Reviewed

    Satoki Ishikawa, Sameer Satish Deshmukh, Sakina Fatima, Takumi Honda, Rio Yokota

    ICML Workshop HiLD   2026.7

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  • Monotonic and Non-Monotonic Length-Performance Relationships in Reasoning RL Reviewed

    Daisuke Nohara, Taishi Nakamura, Rio Yokota

    ICML 2026 Workshop AdaptFM   2026.7

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  • PowerCLIP: Powerset Alignment for Fine-Grained Contrastive Pre-Training Reviewed

    Masaki Kawamura, Nakamasa Inoue, Rintaro Yanagi, Hirokatsu Kataoka, Rio Yokota

    IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)   2026.6

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  • Building Effective Japanese Medical LLMs with an Open Recipe for Domain Adaptation through Continued Pre-training Reviewed

    Akiko Aizawa, Yuki Arase, Fei Cheng, Jiahao Huang, Zhiyi Huang, Junfeng Jiang, Teruhito Kanazawa, Daisuke Kawahara, Kazuma Kobayashi, Takashi Kodama, Sadao Kurohashi, Yusuke Oda, Yuma Tsuta, Zhen Wan, Zhishen Yang and Rio Yokota

    International Conference on Language Resources and Evaluation (LREC)   10405 - 10423   2026.5

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    Language:English   Publishing type:Research paper (international conference proceedings)  

    DOI: 10.63317/47uvbxqph5ph

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  • Optimal Sparsity of Mixture-of-Experts Language Models for Reasoning Tasks Reviewed

    Taishi Nakamura, Satoki Ishikawa, Masaki Kawamura, Takumi Okamoto, Daisuke Nohara, Jun Suzuki, Rio Yokota

    International Conference on Learning Representations (ICLR)   2026.4

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  • Qwen3-Swallow: Continual Pre-Training of Japanese–English Thinking LLMs with Megatron-LM Reviewed

    Kazuki Fujii, Yukito Tajima, Masaki Kawamura, Sakae Mizuki, Taishi Nakamura, Hinari Shimada, Masanari Ohi, Taihei Shiotani, Koshiro Saito, Takumi Okamoto, Shigeki Ishida, Youmi Ma, Hiroya Takamura, Rio Yokota, Naoaki Okazaki

    GPU Technology Conference, San Jose   2026.3

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  • Swallow LLM: Continual Pre-Training and RL for Sovereign AI Reviewed

    Kazuki Fujii, Rio Yokota

    GPU Technology Conference (GTC)   2026.3

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  • Tensor-Core-Optimized Strategies for BLR × Tall-Skinny Matrix Multiplication in BEM Reviewed

    Akihiro Ida, Kazuya Goto, Rio Yokota, Tasuku Hiraishi, Toshihiro Hanawa, Takeshi Iwashita, Masatoshi Kawai, Satoshi Ohshima, Tetsuya Hoshino

    Proceedings of the Supercomputing Asia and International Conference on High Performance Computing in Asia Pacific Region   153 - 164   2026.1

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:ACM  

    DOI: 10.1145/3773656.3773678

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  • FedPM: Federated Learning Using Preconditioned Mixing of Local Parameters Reviewed

    Hiro Ishii, Kenta Niwa, Hiroshi Sawada, Akinori Fujino, Noboru Harada, Rio Yokota

    The 40th Annual AAAI Conference on Artificial Intelligence   2026.1

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  • A Study on the Performance and Usability of Managed Memory and Unified Memory for Accelerating Numerical Calculation Program Reviewed

    Satoshi Ohshima, Akihiro Ida, Masatoshi Kawai, Takeshi Fukaya, Rio Yokota

    2025 IEEE 18th International Symposium on Embedded Multicore/Many-core Systems-on-Chip (MCSoC)   41 - 48   2025.12

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:IEEE  

    DOI: 10.1109/mcsoc67473.2025.00017

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  • Variational Learning Finds Flatter Solutions at the Edge of Stability Reviewed International journal

    Rio Yokota

    Annual Conference on Neural Information Processing Systems (NeurIPS)   2025.12

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  • Masked Gated Linear Unit Reviewed

    Yukito Tajima, Nakamasa Inoue, Yusuke Sekikawa, Ikuro Sato, Rio Yokota

    Annual Conference on Neural Information Processing Systems (NeurIPS)   2025.12

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    Authorship:Last author   Language:English   Publishing type:Research paper (international conference proceedings)  

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  • Leveraging High-Resource English Corpora for Cross-lingual Domain Adaptation in Low-Resource Japanese Medicine via Continued Pre-training Reviewed International journal

    Rio Yokota

    EMNLP Findings   11469 - 11488   2025.11

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    Language:English   Publishing type:Research paper (international conference proceedings)  

    DOI: 10.18653/v1/2025.findings-emnlp.615

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  • Building Instruction-Tuning Datasets from Human-Written Instructions with Open-Weight Large Language Models Reviewed

    Youmi Ma, Sakae Mizuki, Kazuki Fujii, Taishi Nakamura, Masanari Ohi, Hinari Shimada, Taihei Shiotani, Koshiro Saito, Koki Maeda, Kakeru Hattori, Takumi Okamoto, Shigeki Ishida, Rio Yokota, Hiroya Takamura, Naoaki Okazaki

    Conference on Language Modeling (COLM)   2025.10

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    Language:English   Publishing type:Research paper (international conference proceedings)  

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  • Optimal Sparsity of Mixture-of-Experts Language Models for Reasoning Tasks Reviewed

    Taishi Nakamura, Satoki Ishikawa, Masaki Kawamura, Takumi Okamoto, Daisuke Nohara, Jun Suzuki, Rio Yokota

    ICML 2025 2nd AI for Math Workshop   2025.7

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  • Lion Cub: Minimizing Communication Overhead in Distributed Lion Reviewed

    Satoki Ishikawa, Tal Ben-Nun, Brian Van Essen, Rio Yokota, Nikoli Dryden

    ICML 2025 Workshop TTODLer-FM   2025.7

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  • Scaling Large-scale GNN Training to Thousands of Processors on CPU-based Supercomputers Reviewed

    Chen Zhuang, Lingqi Zhang, Du Wu, Peng Chen, Jiajun Huang, Xin Liu, Rio Yokota, Nikoli Dryden, Toshio Endo, Satoshi Matsuoka, Mohamed Wahib

    Proceedings of the 39th ACM International Conference on Supercomputing   57 - 72   2025.6

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:ACM  

    DOI: 10.1145/3721145.3730422

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  • Improving LoRA with Variational Learning.

    Bai Cong, Nico Daheim, Yuesong Shen, Rio Yokota, Mohammad Emtiyaz Khan, Thomas Möllenhoff

    CoRR   abs/2506.14280   2025.6

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    Publishing type:Research paper (scientific journal)  

    DOI: 10.48550/arXiv.2506.14280

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  • On the Interplay Between Precision, Rank, Admissibility, and Iterative Refinement for Hierarchical Low-Rank Matrix Solvers Reviewed

    Thomas Spendlhofer, Qianxiang Ma, Yasuhiro Matsumoto, Rio Yokota

    ISC High Performance   2025.6

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  • Rewriting Pre-Training Data Boosts LLM Performance in Math and Code. Reviewed

    Kazuki Fujii, Yukito Tajima, Sakae Mizuki, Hinari Shimada, Taihei Shiotani, Koshiro Saito, Masanari Ohi, Masaki Kawamura, Taishi Nakamura, Takumi Okamoto, Shigeki Ishida, Kakeru Hattori, Youmi Ma, Hiroya Takamura, Rio Yokota, Naoaki Okazaki

    CoRR   abs/2505.02881   2025.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.48550/arXiv.2505.02881

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  • Quantum Turbulence Coupled with Externally Driven Normal-Fluid Turbulence in Counterflow of Superfluid 4He Reviewed

    Satoshi Yui, Hiromichi Kobayashi, Makoto Tsubota, Rio Yokota

    Journal of the Physical Society of Japan   94 ( 4 )   043601   2025.4

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    DOI: 10.7566/jpsj.94.043601

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  • Local Loss Optimization in the Infinite Width: Stable Parameterization of Predictive Coding Networks and Target Propagation Reviewed

    Satoki Ishikawa, Ryo Karakida, Rio Yokota

    The 13th International Conference on Learning Representations (ICLR)   2025.4

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  • Drop Upcycling: Training Sparse Mixture of Experts with Partial Re-initialization Reviewed

    Taishi Nakamura, Takuya Akiba, Kazuki Fujii, Yusuke Oda, Rio Yokota, Jun Suzuki

    The 13th International Conference on Learning Representations (ICLR)   2025.4

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  • SuperGCN: General and Scalable Framework for GCN Training on CPU-powered Supercomputers Reviewed

    Chen Zhuang, Peng Chen, Xin Liu, Nikoli Dryden, Rio Yokota, Toshio Endo, Satoshi Matsuoka, Mohamed Wahib

    ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPoPP)   2025.3

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  • 新聞記事からつくる 時事と社会に強い日本語LLM

    Kakeru Hattori, Sakae Mizuki, Kazuki Fujii, Taishi Nakamura, Taihei Shiotani, Kai Ueki, Takuro Niitsuma, Akira Kawabata, Hideaki Tamori, Youmi Ma, Koki Maeda, Masanari Ohi, Koshiro Saito, Takumi Okamoto, Shigeki Ishida, Rio Yokota, Hiroya Takamura, Naoaki Okazaki

    2025.3

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  • 模倣学習による大規模言語モデルの指示チューニング

    Youmi Ma, Sakae Mizuki, Kazuki Fujii, Taishi Nakamura, Masanari Ohi, Hinari Shimada, Taihei Shiotani, Koshiro Saito, Koki Maeda, Kakeru Hattori, Takumi Okamoto, Shigeki Ishida, Rio Yokota, Hiroya Takamura, Naoaki Okazaki

    2025.3

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  • Aurora-M: The First Open Source Multilingual Language Model Red-teamed according to the U.S. Executive Order Reviewed

    Taishi Nakamura, Mayank Mishra, Simone Tedeschi, Yekun Chai, Jason T Stillerman, Felix Friedrich, Prateek Yadav, Tanmay Laud, Vu Minh Chien, Terry Yue Zhuo, et al.

    The 31st International Conference on Computational Linguistics (COLING), Industry Track   2025.1

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  • Aurora-M: Open Source Continual Pre-training for Multilingual Language and Code Reviewed

    Taishi Nakamura, Mayank Mishra, Simone Tedeschi, Yekun Chai, Jason T Stillerman, Felix Friedrich, Prateek Yadav, Tanmay Laud, Vu Minh Chien, Terry Yue Zhuo, Diganta Misra, Ben Bogin, Xuan-Son Vu, Marzena Karpinska, Arnav Varma Dantuluri, Wojciech Kusa, Tommaso Furlanello, Rio Yokota, Niklas Muennighoff, Suhas Pai, Tosin Adewumi, Veronika Laippala, Xiaozhe Yao, Adalberto Junior, Alpay Ariyak, Aleksandr Drozd, Jordan Clive, Kshitij Gupta, Liangyu Chen, Qi Sun, Ken Tsui, Noah Persaud, Nour Fahmy, Tianlong Chen, Mohit Bansal, Nicolo Monti, Tai Dang, Ziyang Luo, Tien-Tung Bui, Roberto Navigli, Virendra Mehta, Matthew Blumberg, Victor May, Huu Nguyen, Sampo Pyysalo

    The 31st International Conference on Computational Linguistics (COLING), Industry Track, Abu Dhabi, UAE   2025.1

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  • Scaling Backwards: Minimal Synthetic Pre-Training? Reviewed

    Ryo Nakamura, Ryu Tadokoro, Ryosuke Yamada, Yuki M. Asano, Iro Laina, Christian Rupprecht, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka

    European Conference on Computer Vision (ECCV)   153 - 171   2025

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    DOI: 10.1007/978-3-031-72633-0_9

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  • On the Relationship Between Double Descent of CNNs and Shape/Texture Bias Under Learning Process Reviewed

    Shun Iwase, Shuya Takahashi, Nakamasa Inoue, Rio Yokota, Ryo Nakamura, Hirokatsu Kataoka, Eisaku Maeda

    27th International Conference on Pattern Recognition (ICPR)   95 - 109   2025

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    DOI: 10.1007/978-3-031-78389-0_7

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  • Rethinking Image Super-Resolution from Training Data Perspectives Reviewed

    Go Ohtani, Ryu Tadokoro, Ryosuke Yamada, Yuki M. Asano, Iro Laina, Christian Rupprecht, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka, Yoshimitsu Aoki

    European Conference on Computer Vision (ECCV)   19 - 36   2025

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    DOI: 10.1007/978-3-031-72643-9_2

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  • A Framework for Seamless Integration and Efficient Continual Pre-Training of Large Language Models Reviewed

    Kazuki Fujii, Taishi Nakamura, Rio Yokota

    SC’24 TPC Workshop   2024.11

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  • Continual Pre-Training for Cross-Lingual LLM Adaptation: Enhancing Japanese Language Capabilities Reviewed

    Kazuki Fujii, Taishi Nakamura, Mengsay Loem, Hiroki Iida, Masanari Ohi, Kakeru Hattori, Shota Hirai, Sakae Mizuki, Rio Yokota, Naoaki Okazaki

    Conference on Language Modeling COLM   2024.10

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  • Building a Large Japanese Web Corpus for Large Language Models Reviewed

    Naoaki Okazaki, Kakeru Hattori, Shota Hirai, Hiroki Iida, Masanari Ohi, Kazuki Fujii, Taishi Nakamura, Mengsay Loem, Rio Yokota, Sakae Mizuki

    Conference on Language Modeling COLM   2024.10

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  • Formula-Supervised Visual-Geometric Pre-training Reviewed

    Ryosuke Yamada, Kensho Hara, Hirokatsu Kataoka, Koshi Makihara, Nakamasa Inoue, Rio Yokota, Yutaka Satoh

    European Conference on Computer Vision (ECCV)   57 - 74   2024.9

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    DOI: 10.1007/978-3-031-72670-5_4

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  • 画像超解像における学習データ構築の再考 Reviewed

    Go Ohtani, Ryu Tadokoro, Ryosuke Yamada, Yuki M. asano, Iro Laina, Chistian Repprecht, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka, Yoshimitsu Aoki

    2024.8

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  • 単眼カメラを用いたリアルタイムな3次元マップの変化検出を目的とした密なバンドル調整 Reviewed

    Kai Okawa, Ken Sakurada, Rio Yokota

    2024.8

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  • Scaling Backwards: Minimal Synthetic Pre-training? Reviewed

    Ryu Tadokoro, Ryo Nakamura, Ryosuke Yamada, Yuki M. Asano, Iro Laina, Chistian Repprecht, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka

    第27回 画像の認識・理解シンポジウム (MIRU)   2024.8

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  • An Inherently Parallel H^2-ULV Factorization for Solving Dense Linear Systems on GPUs Reviewed

    Qianxiang Ma, Rio Yokota

    International Journal of High Performance Computing Applications   38 ( 4 )   314 - 336   2024.7

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    DOI: 10.1177/10943420241242021

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  • Variational Learning is Effective for Large Deep Networks Reviewed

    Yuesong Shen, Nico Daheim, Gian Maria Marconi, Peter Nickl, Bai Cong, Bazan Clemen, Emile Marcel Raoul, Rio Yokota, Iryna Gurevych, Daniel Cremers, Mohammad, Emtiyaz Khan, Thomas Möllenhoff

    The 41st International Conference on Machine Learning (ICML)   2024.7

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  • Interaction between quantum turbulence and normal-fluid turbulence in superfluid helium Reviewed

    Hiromichi Kobayashi, Satoshi Yui, Makoto Tsubota, Tomokazu Saito, Rio Yokota

    Thirteenth International Symposium on Turbulence and Shear Flow Phenomena (TSFP13)   2024.6

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  • SIFTer: Self-improving Synthetic Datasets for Pre-training Classification Models Reviewed

    Ryo Hayamizu, Shota Nakamura, Sora Takashima, Hirokatsu Kataoka, Ikuro Sato, Nakamasa Inoue, Rio Yokota

    CVPR SynData Workshop   2024.6

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  • When Does Second-Order Optimization Speed Up Training? Reviewed

    Satoki Ishikawa, Rio Yokota

    The 12th International Conference on Learning Representations (ICLR), Tiny paper   2024.5

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  • DGEMM on integer matrix multiplication unit Reviewed

    Hiroyuki Ootomo, Katsuhisa Ozaki, Rio Yokota

    The International Journal of High Performance Computing Applications   38 ( 4 )   297 - 313   2024.3

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    Deep learning hardware achieves high throughput and low power consumption by reducing computing precision and specializing in matrix multiplication. For machine learning inference, fixed-point value computation is commonplace, where the input and output values and the model parameters are quantized. Thus, many processors are now equipped with fast integer matrix multiplication units (IMMU). It is of significant interest to find a way to harness these IMMUs to improve the performance of HPC applications while maintaining accuracy. We focus on computing double-precision equivalent matrix multiplication using the Ozaki scheme, which computes a high-precision matrix multiplication by using lower-precision computing units, and show the advantages and disadvantages of using IMMU. The experiment using integer Tensor Cores shows that we can compute double-precision matrix multiplication faster than cuBLAS and an existing Ozaki scheme implementation on FP16 Tensor Cores on NVIDIA consumer GPUs. Furthermore, we demonstrate accelerating a quantum circuit simulation by up to 4.85 while maintaining the FP64 accuracy.

    DOI: 10.1177/10943420241239588

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    Other Link: https://journals.sagepub.com/doi/full-xml/10.1177/10943420241239588

  • Variational Low-Rank Adaptation Using IVON. Reviewed

    Bai Cong, Nico Daheim, Yuesong Shen, Daniel Cremers, Rio Yokota, Mohammad Emtiyaz Khan, Thomas Möllenhoff

    CoRR   abs/2411.04421   2024

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    DOI: 10.48550/arXiv.2411.04421

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    Other Link: https://dblp.uni-trier.de/db/journals/corr/corr2411.html#abs-2411-04421

  • Why We Build Local Large Language Models: An Observational Analysis from 35 Japanese and Multilingual LLMs. Reviewed

    Koshiro Saito, Sakae Mizuki, Masanari Ohi, Taishi Nakamura, Taihei Shiotani, Koki Maeda, Youmi Ma, Kakeru Hattori, Kazuki Fujii, Takumi Okamoto, Shigeki Ishida, Hiroya Takamura, Rio Yokota, Naoaki Okazaki

    CoRR   abs/2412.14471   2024

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    DOI: 10.48550/arXiv.2412.14471

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    Other Link: https://dblp.uni-trier.de/db/journals/corr/corr2412.html#abs-2412-14471

  • Natural Gradient Primal-Dual Method for Decentralized Learning. Reviewed

    Kenta Niwa, Hiro Ishii, Hiroshi Sawada, Akinori Fujino, Noboru Harada, Rio Yokota

    IEEE Trans. Signal Inf. Process. over Networks   10   417 - 433   2024

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    DOI: 10.1109/TSIPN.2024.3388948

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  • SegRCDB: Semantic Segmentation via Formula-Driven Supervised Learning Reviewed

    Risa Shinoda, Ryo Hayamizu, Kodai Nakashima, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka

    IEEE/CVF International Conference on Computer Vision (ICCV)   19997 - 20006   2023.10

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    DOI: 10.1109/iccv51070.2023.01835

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  • Pre-training Vision Transformers with Very Limited Synthesized Images Reviewed

    Ryo Nakamura, Sora Takashima, Edgar Josafat Martinez-Noriega, Nakamasa Inoue, Hirokatsu Kataoka, Rio Yokota

    IEEE/CVF International Conference on Computer Vision (ICCV)   20303 - 20312   2023.10

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    DOI: 10.1109/iccv51070.2023.01862

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  • Cache Optimization and Performance Modeling of Batched, Small, and Rectangular Matrix Multiplication on Intel, AMD, and Fujitsu Processors Reviewed

    Sameer Deshmukh, Rio Yokota, George Bosilca

    ACM Transactions on Mathematical Software   49 ( 3 )   1 - 29   2023.9

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    DOI: 10.1145/3595178

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  • Computing Eigenvalue of Symmetric H^2-Matrices in Linear Time with Slicing the Spectrum Reviewed

    Muhammad Ridwan Apriansyah, Rio Yokota

    International Conference on Parallel Processing (ICPP)   11 - 20   2023.8

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    DOI: 10.1145/3605573.3605607

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  • O(N) Distributed Direct Factorization of Structured Dense Matrices Using Runtime Systems Reviewed

    Sameer Deshmukh, Rio Yokota, George Bosilca

    International Conference on Parallel Processing (ICPP)   1 - 10   2023.8

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    DOI: 10.1145/3605573.3605606

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  • 数式ドリブン教師あり学習によるセマンティックセグメンテーション Reviewed

    Risa Shinoda, Ryo Hayamizu, Kodai Nakashima, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka

    2023.7

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  • 学習過程における形状・テクスチャ偏重度の推移と事前学習データセットとの関係について Reviewed

    Shuya Takahashi, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka, Eisaku Maeda

    2023.7

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  • 単眼カメラを用いたリアルタイムな3次元マップの変化検出を目的とした密なバンドル調整 Reviewed

    Kai Okawa, Ken Sakurada, Rio Yokota

    2023.7

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  • Formula-Supervised Visual-Geometric Pre-training Reviewed

    Ryosuke Yamada, Kensho Hara, Hirokatsu Kataoka, Koshi Makihara, Nakamasa Inoue, Rio Yokota, Yutaka Satoh

    第26回画像の認識・理解シンポジウム (MIRU), ロングオーラル   2023.7

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  • Visual Atoms: Pre-training Vision Transformers with Sinusoidal Waves Reviewed

    Sora Takashima, Ryoh Hayamizu, Nakamasa Inoue, Hirokatsu Kataoka, Rio Yokota

    IEEE/CVF Conference on Computer Vision and Pattern Recognition   18579 - 18588   2023.6

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    DOI: 10.1109/cvpr52729.2023.01782

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  • ラージバッチ学習における汎化性能の低下を抑制する正則化手法 Reviewed

    Shota Nakamura, Rio Yokota

    2023.6

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  • 受容野の自動最適化によるモードに適応的な Transformer の開発 Reviewed

    Takuya Asakura, Nakamasa Inoue, Rio Yokota, Koichi Shinoda

    JSAI2023   4I3OS1b05   2023.6

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    DOI: 10.11517/pjsai.JSAI2023.0_4I3OS1b05

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  • Mixed-Precision Random Projection for RandNLA on Tensor Cores Reviewed

    Hiroyuki Ootomo, Rio Yokota

    Platform for Advanced Scientific Computing (PASC)   1 - 11   2023.6

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    DOI: 10.1145/3592979.3593413

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  • Quantum Circuit Simulation by SGEMM Emulation on Tensor Cores and Automatic Precision Selection Reviewed

    Hiroyuki Ootomo, Hidetaka Manabe, Kenji Harada, Rio Yokota

    ISC High Performance   259 - 276   2023.5

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    DOI: 10.1007/978-3-031-32041-5_14

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  • 敵対的距離学習モジュールを用いた特徴変動に頑健な画像認識のための対照学習

    Yoshifumi Sugiyama, Hirokatsu Kataoka, Rio Yokota, Nakamasa Inoue

    2023.3

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  • 画像識別における形状・テクスチャ偏重度と二重降下現象の関係について Reviewed

    Shuya Takahashi, Nakamasa Inoue, Rio Yokota, Hirokatsu Kataoka, Eisaku Maeda

    2023.3

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  • Reducing Shared Memory Footprint to Leverage High Throughput on Tensor Cores and its Flexible API Extension Library Reviewed

    Hiroyuki Ootomo, Rio Yokota

    HPC Asia   1 - 8   2023.2

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    DOI: 10.1145/3578178.3578238

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  • Improving Continual Learning by Accurate Gradient Reconstructions of the Past Reviewed

    Erik Daxberger, Siddharth Swaroop, Kazuki Osawa, Rio Yokota, Richard E. Turner, Jose Miguel Hernandez-Lobato, Mohammad Emtiyaz Khan

    Transactions on Machine Learning Research   2023.2

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  • Empirical Study on Optimizer Selection for Out-of-Distribution Generalization Reviewed

    Hiroki Naganuma, Kartik Ahuja, Shiro Takagi, Tetsuya Motokawa, Rio Yokota, Kohta Ishikawa, Ikuro Sato, Ioannis Mitliagkas

    Transactions on Machine Learning Research   2023.1

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  • 蒸留画像による事前学習効果についての検討 Reviewed

    Ryu Tadokoro, Hirokatsu Kataoka, Rei Kawakami, Rio Yokota, Nakamasa Inoue

    2022.12

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  • ASDL: A Unified Interface for Gradient Preconditioning in PyTorch Reviewed

    Kazuki Osawa, Satoki Ishikawa, Rio Yokota, Shigang Li, Torsten Hoefler

    NeurIPS Workshop Order up! The Benefits of Higher-Order Optimization in Machine Learning   2022.12

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  • Empirical Study on Optimizer Selection for Out-of-Distribution Generalization Reviewed

    Hiroki Naganuma, Kartik Ahuja, Ioannis Mitliagkas, Shiro Takagi, Tetsuya Motokawa, Rio Yokota, Kohta Ishikawa, Ikuro Sato

    NeurIPS Workshop Distshift   abs/2211.08583   2022.12

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    DOI: 10.48550/arXiv.2211.08583

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    Other Link: https://dblp.uni-trier.de/db/journals/corr/corr2211.html#abs-2211-08583

  • QR Factorization of Block Low-Rank Matrices on Multi-Instance GPU Reviewed

    Satoshi Ohshima, Akihiro Ida, Rio Yokota, Ichitaro Yamazaki

    The 23rd International Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT’22)   359 - 369   2022.12

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    DOI: 10.1007/978-3-031-29927-8_28

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  • Informative Sample-Aware Proxy for Deep Metric Learning Reviewed

    Aoyu Li, Ikuro Sato, Kohta Ishikawa, Rei Kawakami, Rio Yokota

    ACM Multimedia Asia   1 - 11   2022.12

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    DOI: 10.1145/3551626.3564942

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  • Scalable Linear Time Dense Direct Solver for 3-D Problems Without Trailing Sub-Matrix Dependencies Reviewed

    Qianxiang Ma, Sameer Deshmukh, Rio Yokota

    The International Conference for High Performance Computing, Networking, Storage, and Analysis (SC22)   1 - 12   2022.11

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    DOI: 10.1109/sc41404.2022.00088

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  • Parallel QR Factorization of Block Low-Rank Matrices Reviewed

    Muhammad Ridwan Apriansyah, Rio Yokota

    ACM Transactions on Mathematical Software, (2022). https://doi.org/10.1145/3538647   48 ( 3 )   1 - 28   2022.9

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    DOI: 10.1145/3538647

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  • Recovering Single Precision Accuracy from Tensor Cores While Surpassing the FP32 Theoretical Peak Performance Reviewed

    Hiroyuki Ootomo, Rio Yokota

    The International Journal of High Performance Computing Application   36 ( 4 )   475 - 491   2022.7

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    DOI: 10.1177/10943420221090256

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  • Replacing Labeled Real-image Datasets with Auto-generated Contours Reviewed

    Hirokatsu Kataoka, Ryo Hayamizu, Ryosuke Yamada, Kodai Nakashima, Sora Takashima, Xinyu Zhang, Edgar Josafat Martinez-Noriega, Nakamasa Inoue, Rio Yokota

    IEEE/CVF Conference on Computer Vision and Pattern Recognition   21200 - 21209   2022.6

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    DOI: 10.1109/cvpr52688.2022.02055

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  • OPIRL: Sample Efficient Off-Policy Inverse Reinforcement Learning via Distribution Matching Reviewed

    Hana Hoshino, Kei Ota, Asako Kanezaki, Rio Yokota

    Proceedings of IEEE International Conference on Robotics and Automation   448 - 454   2022.5

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    DOI: 10.1109/icra46639.2022.9811660

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  • Scalable and Practical Natural Gradient for Large-Scale Deep Learning Reviewed

    Kazuki Osawa, Yohei Tsuji, Yuichiro Ueno, Akira Naruse, Chuan-Sheng Foo, Rio Yokota

    IEEE Transactions on Pattern Analysis and Machine Intelligence 2020;PP:10.1109/TPAMI.2020.3004354   44 ( 1 )   404 - 415   2022.1

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Institute of Electrical and Electronics Engineers ({IEEE})  

    DOI: 10.1109/tpami.2020.3004354

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  • RePOSE: Real-Time Iterative Rendering and Refinement for 6D Object Pose Estimation Reviewed

    Shun Iwase, Xingyu Liu, Rawal Khirodkar, Rio Yokota, Kris M. Kitani

    Proceedings of the International Conference on Computer Vision   2021.10

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  • RePOSE: Fast 6D Object Pose Refinement via Deep Texture Rendering Reviewed

    Shun Iwase, Xingyu Liu, Rawal Khirodkar, Rio Yokota, Kris M. Kitani

    International Conference on Computer Vision   3283 - 3292   2021.10

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    DOI: 10.1109/iccv48922.2021.00329

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  • Self-supervised Continual Pretraining for Class Incremental Image Classification Reviewed

    Hikaru Nakata, Nakamasa Inoue, Rio Yokota

    Proceedings CVPR CLVISION Workshop (Findings)   2021.6

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  • ExaFMM: a high-performance fast multipole method library with C++ and Python interfaces Reviewed

    Tingyu Wang, Rio Yokota, Lorena A. Barba

    The Journal of Open Source Software, 6(61):3145 (2021). 10.21105/joss.03145   6 ( 61 )   3145 - 3145   2021.5

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    DOI: 10.21105/joss.03145

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  • Rich Information is Affordable: A Systematic Performance Analysis of Second-order Optimization Using K-FAC Reviewed

    Yuichiro Ueno, Kazuki Osawa, Yohei Tsuji, Akira Naruse, Rio Yokota

    Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining   2145 - 2153   2020.8

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    DOI: 10.1145/3394486.3403265

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    Other Link: https://dblp.uni-trier.de/conf/kdd/2020

  • Distributed Memory Task-Based Block Low Rank Direct Solver Reviewed

    Sameer Deshmukh, Rio Yokota

    ISC High Performance 2020   2020.6

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  • Distributed Memory Task-Based Block Low Rank Direct Solver Reviewed

    Sameer Deshmukh, Rio Yokota

    ISC High Performance 2020   2020.6

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  • Randomized SVD on TensorCores Reviewed

    Hiroyuki Ootomo, Rio Yokota

    ISC High Performance 2020   2020.6

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  • 巨大行列とAI Reviewed

    横田理央

    数学セミナー   59 ( 2 )   29 - 33   2020.2

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  • Effect of Mixed Precision Computing on H-Matrix Vector Multiplication in BEM Analysis Reviewed

    Rise Ooi, Takeshi Iwashita, Takeshi Fukaya, Akihiro Ida, Rio Yokota

    ACM International Conference Proceeding Series   92 - 101   2020.1

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    DOI: 10.1145/3368474.3368479

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    Other Link: http://arxiv.org/pdf/1911.00093v1

  • QR Decomposition of Block Low-Rank Matrices Reviewed

    Muhammad Ridwan Apriansyah, Rio Yokota

    HPC Asia 2020   2020.1

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  • スーパーコンピューティングコンテスト2019 Reviewed

    横田理央

    数学セミナー   59 ( 1 )   44 - 49   2020.1

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  • Distributed Memory Task-Based Block Low Rank Direct Solver Reviewed

    Sameer Deshmukh, Rio Yokota

    HPC Asia 2020 (poster)   2020.1

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  • Measuring the Effects to Beneficial Batch Size and Required Iteration by LARS on Neural Network Training

    NAGANUMA Hiroki, TATSURO Ide, YOKOTA Rio

    Proceedings of the Annual Conference of JSAI   JSAI2020   4Rin169 - 4Rin169   2020

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    Deep Neural Networks(DNN), which have extremely large numbers of parameters, have been overwhelming other machine learning methods by using enormous volumes of data for the training. Since the training of DNN costs a significant amount of time for the computation, large-scale parallelization has been employed to reduce the training time. Large-batch training increases the batch size to reduce the number of required iterations and hence speeds up the training. However, recent research has shown that the effect of speed up hits a certain limit as the batch size becomes very large. In this paper, we conduct experiments to study the relationship between the batch size and the number of required iterations as the batch size increases up to the full batch using LARS, a commonly used method to adjust the learning rate. Our results experimentally verify that LARS is superior to other optimization methods in reducing the number of iterations and also in generalization performance.

    DOI: 10.11517/pjsai.jsai2020.0_4rin169

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  • Regularizing the fast multipole method for use in molecular simulation Reviewed

    D. S. Shamshirgar, R. Yokota, A. K. Tornberg, B. Hess

    Journal of Chemical Physics   151 ( 23 )   234113   2019.12

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    DOI: 10.1063/1.5122859

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  • Practical deep learning with Bayesian principles Reviewed

    Kazuki Osawa, Siddharth Swaroop, Anirudh Jain, Runa Eschenhagen, Richard E. Turner, Rio Yokota, Mohammad Emtiyaz Khan

    Advances in Neural Information Processing Systems   32   4289 - 4301   2019.12

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    Other Link: http://papers.nips.cc/paper/8681-practical-deep-learning-with-bayesian-principles

  • QR factorization of block low-rank matrices with weak admissibility condition Reviewed

    Akihiro Ida, Hiroshi Nakashima, Tasuku Hiraishi, Ichitaro Yamazaki, Rio Yokota, Takeshi Iwashita

    Journal of Information Processing   27   831 - 839   2019.11

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    DOI: 10.2197/ipsjjip.27.831

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  • TSQR on TensorCores Reviewed

    Hiroyuki Ootomo, Rio Yokota

    The International Conference for High Performance Computing, Networking, Storage, and Analysis   2019.11

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  • On Empirical Analysis of Layer-wised Learning Rate Schedule Reviewed

    Hiroki Naganuma, Rio Yokota

    ACML 2019 Workshop on Statistics & Machine Learning Researchers   2019.11

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  • Runtime System for GPU-based Hierarchical LU factorization Reviewed

    Qianxing Ma, Rio Yokota

    The International Conference for High Performance Computing, Networking, Storage, and Analysis   2019.11

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  • Optimization of numerous small dense-matrix-vector multiplications in h-matrix arithmetic on gpu Reviewed

    Satoshi Ohshima, Ichitaro Yamazaki, Akihiro Ida, Rio Yokota

    Proceedings - 2019 IEEE 13th International Symposium on Embedded Multicore/Many-Core Systems-on-Chip, MCSoC 2019   9 - 16   2019.10

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    DOI: 10.1109/MCSoC.2019.00009

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    Other Link: https://dblp.uni-trier.de/db/conf/mcsoc/mcsoc2019.html#OhshimaYIY19

  • Distributed-memory lattice H-matrix factorization Reviewed

    Ichitaro Yamazaki, Akihiro Ida, Rio Yokota, Jack Dongarra

    International Journal of High Performance Computing Applications   33 ( 5 )   1046 - 1063   2019.9

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    DOI: 10.1177/1094342019861139

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  • Tensorコアを用いたTSQR Reviewed

    Hiroyuki Ootomo, Rio Yokota

    2019.9

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  • Performance optimizations and analysis of distributed deep learning with approximated second-order optimization method Reviewed

    Yohei Tsuji, Kazuki Osawa, Yuichiro Ueno, Akira Naruse, Rio Yokota, Satoshi Matsuoka

    ACM International Conference Proceeding Series   ( 21 )   21 - 8   2019.8

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    DOI: 10.1145/3339186.3339202

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    Other Link: https://dblp.uni-trier.de/db/conf/icppw/icppw2019.html#TsujiOUNYM19

  • Extreme scale FMM-accelerated boundary integral equation solver for wave scattering Reviewed

    Mustafa Abduljabbar, Mohammed Al Farhan, Noha Al-Harthi, Rui Chen, Rio Yokota, Hakan Bagci, David Keyes

    SIAM Journal on Scientific Computing   41 ( 3 )   C245 - C268   2019.6

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    DOI: 10.1137/18M1173599

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  • Large-scale distributed second-order optimization using kronecker-factored approximate curvature for deep convolutional neural networks Reviewed

    Kazuki Osawa, Yohei Tsuji, Yuichiro Ueno, Akira Naruse, Rio Yokota, Satoshi Matsuoka

    Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition   2019-June   12351 - 12359   2019.6

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    DOI: 10.1109/CVPR.2019.01264

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    Other Link: http://arxiv.org/pdf/1811.12019v5

  • Effectiveness of Smoothing for Large-batch Training Using Natural Gradient Descent Reviewed

    Hiroki Naganuma, Rio Yokota

    The 3rd Cross-disciplinary Workshop on Computing Systems, Infrastructures, and Programming (xSIG)   2019.5

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  • A Performance Improvement Approach for Second-Order Optimization in Large Mini-batch Training. Reviewed

    Hiroki Naganuma, Rio Yokota

    19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing(CCGRID)   696 - 703   2019.5

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    DOI: 10.1109/CCGRID.2019.00092

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    Other Link: https://dblp.uni-trier.de/db/conf/ccgrid/ccgrid2019.html#NaganumaY19

  • Exhaustive study of hierarchical allreduce patterns for large messages between GPUs Reviewed

    Yuichiro Ueno, Rio Yokota

    Proceedings - 19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, CCGrid 2019   430 - 439   2019.5

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    DOI: 10.1109/CCGRID.2019.00057

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    Other Link: https://dblp.uni-trier.de/db/conf/ccgrid/ccgrid2019.html#UenoY19

  • Effect of Mixed Precision Computing on H-Matrix Vector Multiplication in BEM Analysis. Reviewed

    Rise Ooi, Takeshi Iwashita, Takeshi Fukaya, Akihiro Ida, Rio Yokota

    CoRR   abs/1911.00093   2019

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  • Highly productive, high-performance application frameworks for Post-Petascale computing Reviewed

    Naoya Maruyama, Takayuki Aoki, Kenjiro Taura, Rio Yokota, Mohamed Wahib, Motohiko Matsuda, Keisuke Fukuda, Takashi Shimokawabe, Naoyuki Onodera, Michel Müller, Shintaro Iwasaki

    Advanced Software Technologies for Post-Peta Scale Computing: The Japanese Post-Peta CREST Research Project   77 - 98   2018.12

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    DOI: 10.1007/978-981-13-1924-2_5

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  • 自然勾配近似法を用いた大規模並列深層学習におけるハイパーパラメータ最適化 Reviewed

    Hiroki Naganuma, Shun Iwase, Linsho Kaku, Hikaru Nakata, Rio Yokota

    2018.9

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  • Performance of Hierarchical-matrix BiCGStab Solver on GPU Clusters Reviewed

    Ichitaro Yamazaki, Ahmad Abdelfattah, Akihiro Ida, Satoshi Ohshima, Stanimire Tomov, Rio Yokota, Jack Dongarra

    Proceedings - 2018 IEEE 32nd International Parallel and Distributed Processing Symposium, IPDPS 2018   930 - 939   2018.8

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    DOI: 10.1109/IPDPS.2018.00102

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    Other Link: https://dblp.uni-trier.de/db/conf/ipps/ipdps2018.html#YamazakiAIOTYD18

  • Fast multipole preconditioners for sparse matrices arising from elliptic equations Reviewed

    Huda Ibeid, Rio Yokota, Jennifer Pestana, David Keyes

    Computing and Visualization in Science   18 ( 6 )   213 - 229   2018.3

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    DOI: 10.1007/s00791-017-0287-5

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  • Accelerating Convolutional Neural Networks Using Low Precision Arithmetic Reviewed

    Hiroki Naganuma, Rio Yokota

    HPC Asia   2018.1

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  • Optimization of hierarchical matrix computation on GPU Reviewed

    Satoshi Ohshima, Ichitaro Yamazaki, Akihiro Ida, Rio Yokota

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   10776 LNCS   274 - 292   2018

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    DOI: 10.1007/978-3-319-69953-0_16

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    Other Link: https://dblp.uni-trier.de/db/conf/scfa/scfa2018.html#OhshimaYIY18

  • Verification of Low-precision Arithmetic for the Acceleration of Convolutional Neural Networks Reviewed

    Hiroki Naganuma, Rio Yokota

    GTC Japan   2017.12

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  • Accelerating Convolutional Neural Networks Using Low-Rank Tensor Decomposition Reviewed

    Kazuki Osawa, Akira Sekiya, Hiroki Naganuma, Rio Yokota

    117 ( 238 )   1 - 6   2017.10

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  • Accelerating matrix multiplication in deep learning by using low-rank approximation Reviewed

    Kazuki Osawa, Akira Sekiya, Hiroki Naganuma, Rio Yokota

    Proceedings - 2017 International Conference on High Performance Computing and Simulation, HPCS 2017   186 - 192   2017.9

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    DOI: 10.1109/HPCS.2017.37

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  • Acceleration of Compressed Models in Deep Learning Using Half Precision Arithmetic Reviewed

    H. Naganuma, K. Osawa, A. Sekiya, R. Yokota

    Japan Society for Industrial and Applied Mathematics Annual Meeting   2017.9

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  • Optimization of Hierarchical Matrix Computations on a Cluster of GPUs Reviewed

    Satoshi Ohshima, Ichitaro Yamazaki, Akihiro Ida, Rio Yokota

    Summer United Workshops on Parallel, Distributed and Cooperative Processing   2017.7

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  • Communication Reducing Algorithms for Distributed Heirarchical N-Body Methods Reviewed

    Mustafa AbdulJabbar, George Markomanolis, Huda Ibeid, Rio Yokota, David Keyes

    32nd International Conference, ISC High Performance   2017.6

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  • Accelerating Convolutional Neural Networks Using Low-Rank Approximation Reviewed

    Kazuki Oosawa, Akira Sekiya, Hiroki Naganuma, Rio Yokota

    22nd Conference of Japan Computational Engineering Society   22   2017.5

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  • Communication Reducing Algorithms for Distributed Hierarchical N-Body Problems with Boundary Distributions Reviewed

    Mustafa Abduljabbar, George Markomanolis, Huda Ibeid, Rio Yokota, David Keyes

    Lecture Notes in Computer Science   10266   79 - 96   2017.2

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    DOI: 10.1007/978-3-319-58667-0_5

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    Other Link: http://arxiv.org/pdf/1702.05459v1

  • Fast Multipole Method as a Matrix-Free Hierarchical Low-Rank Approximation Reviewed

    Rio Yokota, Huda Ibeid, David Keyes

    EIGENVALUE PROBLEMS: ALGORITHMS, SOFTWARE AND APPLICATIONS IN PETASCALE COMPUTING (EPASA 2015)   117   267 - 286   2017

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    DOI: 10.1007/978-3-319-62426-6_17

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  • Performance evaluation of computation and communication kernels of the fast multipole method on intel manycore architecture Reviewed

    Mustafa Abduljabbar, Mohammed Al Farhan, Rio Yokota, David Keyes

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   10417   553 - 564   2017

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    DOI: 10.1007/978-3-319-64203-1_40

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  • Evaluating the compression efficiency of the filters in convolutional neural networks Reviewed

    Kazuki Osawa, Rio Yokota

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   10614 LNCS   459 - 466   2017

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    DOI: 10.1007/978-3-319-68612-7_52

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  • Tapas: An Implicitly Parallel ProgrammingFramework For Hierarchical N-body Algorithms Reviewed

    Fukuda Keisuke, Maruyama Naoya, Yokota Rio, Taura Kenjiro, MATSUOKA SATOSHI

    The 22nd IEEE International Conference on Parallel And Distributed Systems   1100 - 1109   2016.12

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    DOI: 10.1109/ICPADS.2016.143

    DOI: 10.1109/icpads.2016.0145

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  • Communication Optimization of Distributed Memory FMM for Large Scale Boundary Element Methods Invited Reviewed

    Yokota Rio

    Simulation   35 ( 3 )   147 - 153   2016.9

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  • Fast Multipole Method as a Matrix-free Hierarchical Low-rank Approximation Reviewed

    Rio Yokota

    International Workshop on Eigenvalue Problems   2016.9

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  • A Performance Model for the Communication in Fast Multipole Methods on HPC Platforms Reviewed

    Huda Ibeid, Rio Yokota, David Keyes

    International Journal of High Performance Computing Applications   30 ( 4 )   423 - 437   2016.6

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    DOI: 10.1177/1094342016634819

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    Other Link: http://arxiv.org/pdf/1405.6362v1

  • FMM と H^2(HSS) 行列のトレードオフについて Reviewed

    横田理央

    計算工学   21 ( 4 )   3498 - 3501   2016

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  • Scaling FMM with data-driven OpenMP tasks on multicore architectures Reviewed

    Amer, A., Matsuoka, S., Pericàs, M., Maruyama, N., Taura, K., Rio Yokota, Balaji, P.

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   9903 LNCS   156 - 170   2016

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    DOI: 10.1007/978-3-319-45550-1_12

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  • Preconditioning Sparse Matrices Using a Highly Scalable Fast Multipole Method Reviewed

    Rio Yokota, Huda Ibeid, David Keyes

    3rd International Workshops on Advances in Computational Mechanics   2015.10

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  • Multi-Level Restricted Maximum Likelihood Covariance Estimation and Kriging for Large Non-Gridded Spatial Datasets Reviewed

    Julio E. Castrillon-Candas, Marc G. Genton, Rio Yokota

    Spatial Statistics   18 ( 18 )   105 - 124   2015.4

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    DOI: 10.1016/j.spasta.2015.10.006

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    Other Link: http://arxiv.org/pdf/1504.00302v2

  • N-body methods Reviewed

    Mustafa AbdulJabbar, Rio Yokota

    2014.11

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    DOI: 10.1016/B978-0-12-802118-7.00010-8

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  • Fast Multipole Preconditioners for Sparse Linear Solvers Reviewed

    Huda Ibeid, Rio Yokota, Jennifer Pestana, David Keyes

    Proceedings of the 11th World Congress on Computational Mechanics   2014.7

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  • Communication Complexity of the Fast Multipole Method and its Algebraic Variants Invited Reviewed

    Rio Yokota, George Turkiyyah, David Keyes

    Supercomputing Frontiers and Innovations   1 ( 1 )   63 - 84   2014.6

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    A combination of hierarchical tree-like data structures and data access
    patterns from fast multipole methods and hierarchical low-rank approximation of
    linear operators from H-matrix methods appears to form an algorithmic path
    forward for efficient implementation of many linear algebraic operations of
    scientific computing at the exascale. The combination provides asymptotically
    optimal computational and communication complexity and applicability to large
    classes of operators that commonly arise in scientific computing applications.
    A convergence of the mathematical theories of the fast multipole and H-matrix
    methods has been underway for over a decade. We recap this mathematical
    unification and describe implementation aspects of a hybrid of these two
    compelling hierarchical algorithms on hierarchical distributed-shared memory
    architectures, which are likely to be the first to reach the exascale. We
    present a new communication complexity estimate for fast multipole methods on
    such architectures. We also show how the data structures and access patterns of
    H-matrices for low-rank operators map onto those of fast multipole, leading to
    an algebraically generalized form of fast multipole that compromises none of
    its architecturally ideal properties.

    DOI: 10.14529/jsfi140104

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    Other Link: http://arxiv.org/pdf/1406.1974v1

  • Petascale molecular dynamics simulation using the fast multipole method on K computer Reviewed

    Ohno Yousuke, Yokota Rio, Koyama Hiroshi, Morimoto Gentaro, Hasegawa Aki, Masumoto Gen, Okimoto Noriaki, Hirano Yoshinori, Ibeid Huda, Ibeid Huda, Narumi Tetsu, Taiji Makoto

    Computer Physics Communications   185 ( 10 )   2575 - 2585   2014.6

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    DOI: 10.1016/j.cpc.2014.06.004

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  • Fast N-body Methods as a Compute-Bound Preconditioner for Sparse Solvers on GPUs Reviewed

    YOKOTA Rio

    GPU Technology Conference   2014.3

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  • High Performance Numerical Algorithms for Seismic and Reservoir Simulations Reviewed

    LTAIEF Hatem, YOKOTA Rio

    GPU Technology Conference   2014.3

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  • Fast Multipole Method Preconditioning Reviewed

    PESTANA Jennifer, YOKOTA Rio, IBEID Huda, KEYES David

    International Conference On Preconditioning Techniques For Scientific And Industrial Applications   2013.6

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  • Investigating New Numerical Techniques for Reservoir Simulations on GPUs Reviewed

    ABDELFETTAH Ahmad, LTAIEF Hatem, YOKOTA Rio

    GPU Technology Conference   2013.3

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  • Fork-join and data-driven execution models on multi-core architectures: Case study of the FMM Reviewed

    Abdelhalim Amer, Naoya Maruyama, Miquel Pericàs, Kenjiro Taura, Rio Yokota, Satoshi Matsuoka

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   7905   255 - 266   2013

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    DOI: 10.1007/978-3-642-38750-0_19

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  • A Task Parallelism Meets Fast Multipole Methods Reviewed

    TAURA Kenjiro, NAKASHIMA Jun, YOKOTA Rio, MARUYAMA, Naoya

    Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems   2012.11

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  • An FMM Based on Dual Tree Traversal for Many-core Architectures Reviewed

    Rio Yokota

    Journal of Algorithms and Computational Technology   7 ( 3 )   301 - 324   2012.9

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    The present work attempts to integrate the independent efforts in the fast
    N-body community to create the fastest N-body library for many-core and
    heterogenous architectures. Focus is placed on low accuracy optimizations, in
    response to the recent interest to use FMM as a preconditioner for sparse
    linear solvers. A direct comparison with other state-of-the-art fast N-body
    codes demonstrates that orders of magnitude increase in performance can be
    achieved by careful selection of the optimal algorithm and low-level
    optimization of the code. The current N-body solver uses a fast multipole
    method with an efficient strategy for finding the list of cell-cell
    interactions by a dual tree traversal. A task-based threading model is used to
    maximize thread-level parallelism and intra-node load-balancing. In order to
    extract the full potential of the SIMD units on the latest CPUs, the inner
    kernels are optimized using AVX instructions. Our code -- exaFMM -- is an order
    of magnitude faster than the current state-of-the-art FMM codes, which are
    themselves an order of magnitude faster than the average FMM code.

    DOI: 10.1260/1748-3018.7.3.301

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  • Petascale turbulence simulation using a highly parallel fast multipole method Reviewed

    Yokota Rio, Barba Lorena, Barba Lorena, Narumi Tetsu, Yasuoka Kenji

    Computer Physics Communications   184 ( 3 )   445 - 455   2012.9

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.cpc.2012.09.011

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  • 4096GPUを用いた4096³規模の一様等方性乱流の渦法解析

    横田 理央, Barba Lorena, 成見 哲

    Tsubame ESJ. : e-science journal   6   1 - 6   2012.7

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  • Petascale Fast Multipole Methods on GPUs Reviewed

    YOKOTA Rio

    The 11th International Symposium on Parallel and Distributed Computing   2012.6

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  • Data-Driven Fast Multipole Method on Distributed Memory Systems with Hardware Accelerators Reviewed

    Hatem Ltaief, Rio Yokota

    21st International Conference on Domain Decomposition Methods   2012.6

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  • Scalable Force Directed Graph Layout Algorithms Using Fast Multipole Methods Reviewed

    Enas Yunis, Rio Yokota, Aron Ahmadia

    Proceedings of the 11th International Symposium on Parallel and Distributed Computing   180 - 187   2012.6

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    DOI: 10.1109/ispdc.2012.32

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  • Recent Trends in Hierarchical N-body Methods on GPUs Reviewed

    YOKOTA Rio, BARBA Lorena

    GPU Technology Conference   2012.5

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  • A Parallel Numerical Simulation of Dust Particles Using Direct Numerical Simulation Reviewed

    Hoang Vu Nguyen, Rio Yokota, Georgiy Stenchikov

    Proceedings of the European Geosciences Union General Assembly   2012.4

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  • Ensemble Reviewed

    Rio Yokota

    (2012)   14 ( 2 )   85 - 89   2012.4

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    DOI: 10.11436/mssj.14.85

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  • Data-Driven Execution of Fast Multipole Methods Reviewed

    Hatem Ltaief, Rio Yokota

    Concurrency and Computation: Practice and Experience   26 ( 11 )   1935 - 1946   2012.3

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    DOI: 10.1002/cpe.3132

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    Other Link: http://arxiv.org/pdf/1203.0889v1

  • Optimization of Molecular Dynamics Core Program on the K computer Reviewed

    Yousuke Ohno, Rio Yokota, Hiroshi Koyama, Gentaro Morimoto, Aki Hasegawa, Gen Masumoto, Tetsu Narumi, Makoto Taiji

    Proceedings of JSST 2012 International Conference on Simulation Technology   2012

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  • FMM Tree Construction on GPUs Reviewed

    YOKOTA Rio

    Ensemble   14 ( 2 )   85 - 89   2012

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    DOI: 10.11436/mssj.14.85

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  • A Task Parallel Implementation of Fast Multipole Methods Reviewed

    Kenjiro Taura, Jun Nakashima, Rio Yokota, Naoya Maruyama

    2012 SC COMPANION: HIGH PERFORMANCE COMPUTING, NETWORKING, STORAGE AND ANALYSIS (SCC)   617 - 625   2012

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    DOI: 10.1109/SC.Companion.2012.86

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  • Scalable Fast Multipole Methods for Vortex Element Methods Reviewed

    Qi Hu, Nail A. Gumerov, Rio Yokota, Lorena Barba, Ramani Duraiswami

    2012 SC COMPANION: HIGH PERFORMANCE COMPUTING, NETWORKING, STORAGE AND ANALYSIS (SCC)   2012

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  • Scalable Fast Multipole Methods for Vortex Element Methods Reviewed

    Qi Hu, Nail A. Gumerov, Rio Yokota, Lorena Barba, Ramani Duraiswami

    2012 SC COMPANION: HIGH PERFORMANCE COMPUTING, NETWORKING, STORAGE AND ANALYSIS (SCC)   1408 - +   2012

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  • Petascale Turbulence Simulation Using FMM Reviewed

    Rio Yokota, Tetsu Narumi, Lorena Barba, Kenji Yasuoka

    IPSJ SIG Notes   2011 ( 29 )   1 - 8   2011.11

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    Fast multipole methods (FMM) were originally developed for accelerating N-body problems in astrophysics and other particle based methods. A recent trend in HPC has been to use FMMs in unconventional application areas. We have performed a 20483 turbulence calculation using an FMM designed for large scale GPU systems. The proposed method uses a hybridization of the treecode and FMM, and combines the data-parallel treecode with the O(N) FMM. The run on TSUBAME 2.0 using 4096 GPUs achieved 74 % parallel efficiency, and the sustained performance reached 1.01 PFlops.

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  • FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method Reviewed

    Rio Yokota, L. A. Barba

    Computers and Fluids   80 ( 80 )   17 - 27   2011.10

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    DOI: 10.1016/j.compfluid.2012.08.002

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    Other Link: http://arxiv.org/pdf/1110.2921v4

  • Hierarchical N-body simulations with auto-tuning for heterogeneous systems Reviewed

    Rio Yokota, Lorena A. Barba

    Computing in Science and Engineering   14 ( 3 )   30 - 39   2011.8

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    DOI: 10.1109/MCSE.2012.1

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    Other Link: http://arxiv.org/pdf/1108.5815v2

  • A Tuned and Scalable Fast Multipole Method as a Preeminent Algorithm for Exascale Systems Reviewed

    Rio Yokota, Lorena Barba

    International Journal of High Performance Computing Applications   26 ( 4 )   337 - 346   2011.6

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    DOI: 10.1177/1094342011429952

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    Other Link: http://arxiv.org/pdf/1106.2176v2

  • Parameter Tuning of a Hybrid Treecode-FMM on GPUs Reviewed

    YOKOTA Rio, BARBA Lorena

    The First International Workshop on Characterizing Applications for Heterogeneous Exascale Systems   2011.6

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  • Comparing the Treecode with FMM on GPUs for Vortex Particle Simulations of a Leapfrogging Vortex Ring Reviewed

    Rio Yokota, L. A. Barba

    COMPUTERS & FLUIDS   45 ( 1 )   155 - 161   2011.6

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    DOI: 10.1016/j.compfluid.2010.11.029

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  • Fast Multipole Method vs. Spectral Methods for the Simulation of Isotropic Turbulence on GPUs Reviewed

    Rio Yokota, Lorena Barba

    Proceedings of the 23rd International Conference on Parallel Computational Fluid Dynamics   2011.5

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  • Treecode and fast multipole method for N-body simulation with CUDA Reviewed

    Rio Yokota, Lorena Barba

    2011.2

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    DOI: 10.1016/B978-0-12-384988-5.00009-7

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  • Vortex methods for the simulation of turbulent flows Reviewed

    Rio Yokota, Shinnosuke Obi

    Journal of Fluid Science and Technology   6 ( 1 )   14 - 29   2011.1

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    DOI: 10.1299/jfst.6.14

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  • N-body Simulation and FMM on the Large-scale GPU Cluster at Nagasaki University Reviewed

    YOKOTA Rio, HAMADA Tsuyoshi

    Journal of the Japan Society for Computational Engineering and Science   15 ( 4 )   2416 - 2419   2010.10

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  • (Really) Fast macromolecular electrostatics – fast algorithms, open software and accelerated computing Reviewed

    YOKOTA Rio, BARDHAN Jaydeep, KNEPLEY Matt, BARBA Lorena

    ACS Division of Physical Chemistry 240th National Meeting   2010.8

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  • Biomolecular electrostatics using a fast multipole BEM on up to 512 GPUs and a billion unknowns Reviewed

    Rio Yokota, Jaydeep P. Bardhan, Matthew G. Knepley, L. A. Barba, Tsuyoshi Hamada

    COMPUTER PHYSICS COMMUNICATIONS   182 ( 6 )   1272 - 1283   2010.7

  • Performance of the Fast Multipole Method on GPUs Using Various Kernels Reviewed

    Rio Yokota, Lorena Barba

    Proceedings of the 9th World Congress on Computational Mechanics   2010.7

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  • Comparing vortex methods and finite difference methods in a homogeneous turbulent shear flow Reviewed

    R. Yokota, S. Obi

    INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN FLUIDS   63 ( 7 )   828 - 846   2010.7

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    DOI: 10.1002/fld.2102

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  • Comparing the Treecode with FMM on GPUs for Vortex Particle Simulations of a Leapfrogging Vortex Ring Reviewed

    Rio Yokota, Lorena Barba

    22nd International Conference on Parallel Computational Fluid Dynamics   2010.5

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  • Lagrangian simulation of turbulence using vortex methods Reviewed

    YOKOTA Rio, OBI Shinnosuke

    2nd International Workshops on Advances in Computational Mechanics   2010.3

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  • 42 TFlops Hierarchical N-body Simulation on GPUs with Applications in both Astrophysics and Turbulence Reviewed

    HAMADA Tsuyoshi, YOKOTA Rio, NITADORI Keigo, NARUMI Tetsu, YASUOKA Kenji, TAIJI Makoto, OGURI Kiyoshi

    Supercomputing 2009   1 - 12   2009.11

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    DOI: 10.1145/1654059.1654123

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  • PetRBF--A parallel O(N) algorithm for radial basis function interpolation Reviewed

    Rio Yokota, L. A. Barba, Matthew G. Knepley

    COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING   199 ( 25 )   1793 - 1804   2009.9

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    DOI: 10.1016/j.cma.2010.02.008

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    Other Link: http://arxiv.org/pdf/0909.5413v1

  • Fast Multipole Methods on GPUs for the Meshfree Simulation of Turbulence Reviewed

    Rio Yokota, Tetsu Narumi, Ryuji Sakamaki, Kenji Yasuoka, Shinnosuke Obi

    Proceedings of the 10th US National Congress on Computational Mechanics   2009.7

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  • Fast multipole methods on a cluster of GPUs for the meshless simulation of turbulence Reviewed

    Rio Yokota, Tetsu Narumi, Ryuji Sakamaki, Shun Kameoka, Shinnosuke Obi, Kenji Yasuoka

    Computer Physics Communications   180 ( 11 )   2066 - 2078   2009.6

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    DOI: 10.1016/j.cpc.2009.06.009

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  • DNS of Homogeneous Turbulence Using Vortex Methods Accelerated by the FMM on a Cluster of GPUs Reviewed

    Rio Yokota, Tetsu Narumi, Ryuji Sakamaki, Shun Kameoka, Kenji Yasuoka, Shinnosuke Obi

    Proceedings of the 21st International Conference on Parallel Compuational Fluid Dynamics   2009.5

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  • Lagrangian Vortex Methods in Turbulent Channel Flows Reviewed

    R. Yokota, K. Fukagata, S. Obi

    ADVANCES IN TURBULENCE XII - PROCEEDINGS OF THE 12TH EUROMECH EUROPEAN TURBULENCE CONFERENCE   132   893 - 893   2009

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    DOI: 10.1007/978-3-642-03085-7_214

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  • 2002 Numerical simulation of biological cell behavior in a micro channel by using CIP-Level Set method Reviewed

    TAMURA Shuichi, YOKOTA Rio, FUKAGATA Koji

    The Proceedings of The Computational Mechanics Conference   2009 ( 0 )   546 - 547   2009

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    We developed a numerical method based on the Level Set method, which can simulate biological cell behavior in micro channels. The isotropic compliant wall model is used to model the cell membrane and the surface force is calculated from the local displacement of membrane computed by using the Level Set function. The biological cell model behavior is investigated in a channel with sudden expansion and contraction. The shape of the cell model is found to be elongated in the contracted region and semicircle in the expanded region. The collision between two cell models in a T-junction is also investigated. When the cell models touch with each other, their boundaries overlap. A repulsion model is proposed to avoid this overlap.

    DOI: 10.1299/jsmecmd.2009.22.546

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  • Validation of Vortex Methods for a Turbulent Channel Flow Reviewed

    Yokota Rio, Obi Shinnosuke

    2009   253 - 253   2009

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    The vortex method is applied to the calculation of a turbulent channel flow of Re_b=5600, and the results are compared with a finite difference calculation. The fast multipole method was modified for the two way periodic boundary condition. The particle strength exchange was selected as the viscous diffusion scheme. The wall vorticity flux is calculated exactly, using a Neumann condition for the vorticity equation at the wall. The mean velocity profile agrees quantitatively between the vortex method and finite difference method.

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  • Meshfree Simulation of Turbulence Using the Fast Multipole Methods on GPUs Reviewed

    Rio Yokota, Tetsu Narumi, Ryuji Sakamaki, Shun Kameoka, Kenji Yasuoka, Shinnosuke Obi

    Proceedings of the 22nd Symposium on Computational Fluid Dynamics   2008.12

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  • Direct Numerical Simulation of Homogeneous Shear Flow Using Vortex Methods Reviewed

    Rio Yokota, Shinnosuke Obi

    Proceedings of the 4th International Conference on Vortex Flows and Vortex Models   2008.4

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  • Mesh-Free Simulation of the Homogeneous Shear Flow Using Vortex Methods Reviewed

    Rio Yokota, Shinnosuke Obi

    Proceedings of the 23rd IIS Turbulence and Shear Flow Dynamics Symposium   2008.3

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  • The Study of Colliding Vortex Rings Using a Special-Purpose Computer and FMM Reviewed

    Tarun K. Sheel, Rio Yokota, Kenji Yasuoka, Shinnosuke Obi

    Transactions of the Japan Society for Computational Engineering and Science, 20080003 (2008)   20080003   20080003   2008.1

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    DOI: 10.11421/jsces.2008.20080003

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  • Vortex Method Calculation of a Turbulent Channel Flow Reviewed

    Yokota Rio, Fukagata Koji, Obi Shinnosuke

    2008   337 - 337   2008

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    The vortex method is applied to the calculation of a turbulent channel flow of Re_b=5600, and the results are compared with a finite difference calculation. The mean velocity profile agrees quantitatively between the vortex method and finite difference method for the duration of one walkout time.

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  • Computation of wing-tip vortex by a three-dimensional vortex method Reviewed

    SATO Akira, YOKOTA Rio, OBI Shinnosuke

    21st Symposium on Computational Fluid Dynamics   2007.12

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  • Calculation of isotropic turbulence using a pure Lagrangian vortex method Reviewed

    R. Yokota, T. K. Sheel, S. Obi

    JOURNAL OF COMPUTATIONAL PHYSICS   226 ( 2 )   1589 - 1606   2007.10

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    DOI: 10.1016/j.jcp.2007.06.003

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  • Pure Lagrangian vortex methods for the simulation of decaying isotropic turbulence Reviewed

    YOKOTA RIO, OBI SHINNOSUKE

    Proceedings of 5th Int. Symp. Turbulent Shear Flow Phenomena   365 - 370   2007.8

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    一様等方性乱流場を渦法により計算し、従来行なわれることのなかったDNSとの直接的な比較を通じて、双方の手法の比較を行なうとともに、渦法でこれまで評価が十分にされなかったエネルギー保存性などについて検討を加えた。

    DOI: 10.1615/tsfp5.560

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  • Vortex Methods for the Calculation of Homogeneous Shear Flows Reviewed

    Yokota Rio, Obi Shinnosuke

    2007   195 - 195   2007

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    The vortex method is applied to the calculation of a homogeneous shear flow of Re_λ=25, and the results are compared with a finite difference calculation. The fast multipole method was modified for the shear periodic boundary condition. The core spreading method and particle strength exchange were selected as the viscous diffusion scheme. The time evolution of the energy spectrum, kinetic energy and enstrophy are shown for these different cases. The component energy ratio and particle density distribution were also examined for all cases.

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  • 662 Mesh-free Turbulence Simulation Using Vortex Methods Reviewed

    YOKOTA Rio, OBI Shinnosuke

    The Proceedings of Conference of Tokai Branch   2007 ( 0 )   323 - 324   2007

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    DOI: 10.1299/jsmetokai.2007.56.323

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  • Vortex flow simulation between multiple bridge decks Reviewed

    YOKOTA Rio, OBI Shinnosuke

    Whither Turbulence Prediction and Control   2006.3

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  • 2016 Simulation of a Wake using a 3-D Vortex Element Method Reviewed

    YOKOTA Rio, OBI Shinnosuke

    The proceedings of the JSME annual meeting   2006 ( 0 )   31 - 32   2006

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    The wake of a bluff body is calculated using a 3-D Vortex Method and turbulence statistics are calculated from the results, which are then compared with measurements by Particle Image Velocimetry and a URANS calculation. It is shown that when compared to a 2-D Vortex Method calculation, which was previously performed by the authors, the results of the 3-D calculation is much closer to the PIV measurements and URANS calculation.

    DOI: 10.1299/jsmemecjo.2006.1.0_31

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  • 1202 Calculation of Fluid Structure Interaction using VEM and BEM(1) Reviewed

    Yokota Rio, Obi Shinnosuke

    The Proceedings of the Fluids engineering conference   2006 ( 0 )   _1202 - a_   2006

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    Fluid structure interaction of a circular cylinder is simulated by the coupling of a Vortex Element Method and Boundary Element Method. Both methods are volume-mesh-free, and thus alleviates the burden on handeling moving boundary problems in general. The rigid vibration of the cylinder is examined first, and compared with experimental studies. Then, the elastic deformation is considered.

    DOI: 10.1299/jsmefed.2006._1202-a_

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  • 複数の鈍い形状物体周りの渦流れシミュレーション Reviewed

    Rio Yokota, Shinnosuke Obi

    2005.12

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  • Vortex flow simulation of multiple bluff bodies

    YOKOTA Rio, TOKAI Norihiko, OBI Shinnosuke

    The Proceedings of The Computational Mechanics Conference   2004 ( 0 )   731 - 732   2004

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    乱流の数値予測法の比較検証を目的として、一様流中に置かれた非流線型物体周りの流れを渦法と非定常RANSで計算した。2次元の計算に関しては、計算精度と時間のいずれの面でも両者の間には大きな差は見られなかった。

    DOI: 10.1299/jsmecmd.2004.17.731

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Books

  • 巨大行列とAI

    Rio Yokota( Role: Contributor)

    2020.2 

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    Responsible for pages:29-33   Language:Japanese  

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  • スーパーコンピューティングコンテスト2019

    Rio Yokota( Role: Contributor)

    2020.1 

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    Responsible for pages:44-49   Language:Japanese  

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  • High Performance Parallelism Pearls

    YOKOTA Rio( Role: Joint editorN-body methods on Xeon Phi coprocessors)

    Morgan Kaufmann  2014.11  ( ISBN:9780128021187

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  • GPU Computing Gems

    Rio Yokota, Lorena Barba( Role: ContributorTreecode and fast multipole method for N-body simulation with CUDA)

    Morgan Kaufmann  2011  ( ISBN:0123849888

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  • 大規模言語モデルの強化学習による効率的な論理推論

    Daisuke Nohara, Taishi Nakamura, Rio Yokota

    2026.3

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  • 視覚・言語モデルにおける日本語OCR性能の向上

    Shungo Yasuda, Rio Yokota

    2026.3

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  • One-Shot NASによるBERTのモデル圧縮

    Takumi Okamoto, Rio Yokota

    2024.5

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  • 継続事前学習による日本語に強い大規模言語モデルの構築

    Kazuki Fujii, Taishi Nakamura, Mengsay Loem, Hiroki Iida, Masanari Ohi, Kakeru Hattori, Shota Hirai, Sakae Mizuki, Rio Yokota, Naoaki Okazaki

    2024.3

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  • 継続学習を用いた効率の良いマルチリンガル・マルチエキスパートモデルの開発

    Taishi Nakamura, Rio Yokota

    2024.3

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  • 大規模言語モデルの日本語能力の効率的な強化: 継続事前学習における語彙拡張と対訳コーパスの活用

    Sakae Mizuki, Hiroki Iida, Kazuki Fujii, Taishi Nakamura, Mengsay Loem, Masanari Ohi, Kakeru Hattori, Shota Hirai, Rio Yokota, Naoaki Okazaki

    2024.3

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  • Swallowコーパス: 日本語大規模ウェブコーパス

    Naoaki Okazaki, Kakeru Hattori, Shota Hirai, Hiroki Iida, Masanari Ohi, Kazuki Fujii, Taishi Nakamura, Mengsay Loem, Rio Yokota, Sakae Mizuki

    2024.3

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  • 大規模言語モデルの構造探索

    Takumi Okamoto, Rio Yokota

    2024.3

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  • 大規模言語モデルの分散並列学習

    Kazuki Fujii, Rio Yokota

    2024.3

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  • Visual SLAM を目的とした深度の一貫性を考慮した密なバンドル調整

    Kai Okawa, Ken Sakurada, Rio Yokota

    2024.1

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  • Attempt to improve the computational performance by multi-processes GPU execution

    大島聡史, 伊田明弘, 河合直聡, 深谷猛, 横田理央, 山崎市太郎

    計算工学講演会論文集(CD-ROM)   29   2024

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    J-GLOBAL

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  • 超解像事前学習における核心的要素の解明

    Go Ohtani, Ryu Tadokoro, Hirokatsu Kataoka, Nakamasa Inoue, Rio Yokota, Yoshimitsu Aoki

    2023.12

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  • Two-way coupled simulation of quantum turbulence and normal-fluid turbulence in superfluid helium-4

    Hiromichi Kobayashi, Satoshi Yui, Makoto Tsubota, Tomokazu Saito, Rio Yokota

    APS DFD 76th Annual Meeting of the Division of Fluid Dynamics   2023.11

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  • Two-phase flow of quantum turbulence and normal-fluid turbulence in superfluid helium-4

    Hiromichi Kobayashi, Satoshi Yui, Makoto Tsubota, Rio Yokota

    ERCOFTAC Symposium on Engineering Turbulence Modeling and Measurements (ETMM)   2023.9

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  • 超流動ヘリウム4の量子乱流:常流体乱流による渦糸バンドルの形成

    Satoshi Yui, Hiromichi Kobayashi, Makoto Tsubota, Tomokazu Saito, Rio Yokota

    2023.9

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  • Vortex-Filament Bundle Induced by Normal-Fluid Turbulence in Turbulent Superfluid Helium-4

    Satoshi Yui, Hiromichi Kobayashi, Makoto Tsubota, Tomokazu Saito, Rio Yokota

    International Symposium on Quantum Fluids and Solids (QFS)   2023.8

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  • Vortex-filament bundle induced by normal-fluid turbulence in turbulent superfluid helium-4

    Hiromichi Kobayashi, Satoshi Yui, Makoto Tsubota, Tomokazu Saito, Rio Yokota

    International Symposium on Quantum Fluids and Solids (QFS)   2023.8

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  • Tensorコアによる単精度行列積エミュレーションの自動精度選択を用いた量子回路シミュレーション

    Hiroyuki Ootomo, Hidetaka Manabe, Kenji Harada, Rio Yokota

    2023.3

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  • GPUとA64FXにおけるTransformerの性能比較

    Shukai Nakamura, Rio Yokota

    2023.3

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  • ニュートンフラクタル画像による事前学習効果

    Toshiki Omi, Ryo Nakamura, Hirokatsu Kataoka, Nakamasa Inoue, Rio Yokota

    2023.3

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  • 深層学習における勾配の前処理法に関する検討

    Satoki Ishikawa, Rio Yokota

    2023.3

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  • 量子渦計算の高速多重極展開法を用いた高速化

    Tomokazu Saito, Rio Yokota

    2023.3

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  • O(N) Factorization of Dense Matrices on GPUs Without Trailing Submatrix Dependencies

    Qianxiang Ma, Rio Yokota

    SIAM Conference on Computational Science and Engineering (CSE)   2023.2

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  • Parallel QR Factorization of Block Low-Rank Matrices

    Muhammad Ridwan Apriansyah, Rio Yokota

    SIAM Conference on Computational Science and Engineering (CSE)   2023.2

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  • CUDA Fortran+MIG+UVMを用いたBLR行列QR分解の大規模高速化

    Satoshi Ohshima, Akihiro Ida, Masatoshi Kawai, Rio Yokota, Ichitaro Yamazaki

    2023 ( HPC-190 )   2023

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    J-GLOBAL

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  • 対称ブロック低ランク行列の精度保証付き固有値問題解法

    Akihiro Ida, Takeshi Ogita, Rio Yokota

    2022.9

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  • Tensorコアを用いた単精度行列積エミュレーションのアプリケーションでの評価

    Hiroyuki Ootomo, Rio Yokota

    2022.7

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  • 走行動画の大規模自己教師あり学習の検討と計画

    Tomoya Takahashi, Shingo Yashima, Kohta Ishikawa, Ikuro Sato, Rio Yokota

    2022.7

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  • ViTのファインチューニング時におけるNASのモデル縮小効果

    Xinyu Zhang, Sora Takashima, Rio Yokota

    2022.6

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  • Vision Transformerにおけるバッチサイズの汎化性能への影響

    Shukai Nakamura, Rio Yokota

    2022.3

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  • 深層学習における2次最適化の汎化性能の検証

    Hiro Ishii, Rio Yokota

    2022.3

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  • マルチインスタンスGPU上におけるBLR行列のQR分解

    大島聡史, 伊田明弘, 横田理央, 山崎市太郎

    日本応用数理学会年会講演予稿集(CD-ROM)   2022   2022

  • TensorCoreを用いた精度補正単精度行列積

    Hiroyuki Ootomo, Rio Yokota

    2021.7

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  • 画像分類のための継続的な事前学習における教師なし表現学習の堅牢性に関する検証

    Hikaru Nakata, Rio Yokota

    2020.6

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  • TensorコアのAPIの構造解析を用いた拡張ライブラリの開発

    Hiroyuki Ootomo, Rio Yokota

    2020.3

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  • 確率的重み付け平均法のラージバッチ学習における有用性の検証

    Takahiro Shohata, Hiroki Naganuma, Rio Yokota

    2020 ( 1 )   359 - 360   2020.2

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  • 早期終了タイミングを予測する:深層学習における確率勾配の分布の変化点検出

    Keita Yashima, Kohta Ishikawa, Ikuro Sato, Tetsuhiro Nomura, Rio Yokota, Satoshi Matsuoka

    2019.11

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  • Flexible and Simplistic Hierarchical Matrix-Based Fast Direct Solver

    P. Spalthoff, R. Yokota

    The 170th Workshop on High Performance Computing   2019.7

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  • GPU Implementation of TSQR Using Tensor Cores

    H. Ootomo, R. Yokota

    The 170th Workshop on High Performance Computing   2019.7

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  • Improving the Generalization Gap in Large-batch Training Using Noise Injection

    Hiroki Naganuma, Rio Yokota

    IEICE General Conference   2019.3

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  • Second Order Optimization for Large Scale Parallel Deep Learning

    Rio Yokota, Kazuki Osawa, Yohei Tsuji, Yuichiro Ueno, Akira Naruse

    IEICE General Conference   2019.3

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  • Batched QR Decomposition Using TensorCores

    Hiroyuki Ootomo, Rio Yokota

    The 81st National Convention of IPSJ   2019.3

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  • Variational Inference in Deep Learning Using Natural Gradient Descent

    Hikaru Nakata, Kazuki Osawa, Rio Yokota

    The 81st National Convention of IPSJ   2019.3

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  • Second Order Optimization for Distributed Data-parallel Deep Learning on 4000 GPUs

    Rio Yokota, Yohei Tsuji, Kazuki Osawa

    I2R-TokyoTech Co-workshop on DL 2.0   2019.3

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  • Fisher情報行列の解析に基づく大規模深層学習のための二次最適化手法

    Kazuki Osawa, Rio Yokota, Chuan-Sheng Foo, Vijay Chandrasekhar

    2019.3

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  • 大規模並列深層学習のための目的関数の平滑化

    Hiroki Naganuma, Rio Yokota

    2019 ( 1 )   315 - 316   2019.2

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  • GPUによる階層型行列計算法の高速化に向けた多数の小密行列ベクトル積計算の最適化

    Satoshi Ohshima, Ichitaro Yamazaki, Akihiro Ida, Rio Yokota

    2019   2019

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  • K-FACと分散処理による深層学習の高速化

    Yohei Tsuji, Kazuki Osawa, Rio Yokota, Satoshi Matsuoka

    2018.7

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  • Software Auto-Tuning for Hierarchical Matrix Computation

    大島 聡史, 山崎 市太郎, 伊田 明弘, 横田 理央

    計算工学講演会論文集 Proceedings of the Conference on Computational Engineering and Science   23   2018.6

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  • Deep Learning Using Kronecker-factored Approximation of Fisher Matrix

    Hiroyuki Ohtomo, Kazuki Osawa, Rio yokota

    The 80th National Convention of IPSJ   2018.3

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  • Hyper-parameter Tuning for Approximate Natural Gradient Methods

    Yuji Kuwamura, Kazuki Osawa, Rio Yokota

    The 80th National Convention of IPSJ   2018.3

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  • Distributed Learning of Deep Neural Networks Using the Kronecker Factorization of the Fisher Information Matrix

    Hiroyuki Otomo, Kazuki Osawa, Rio Yokota

    The 163rd Workshop on High Performance Computing   2018.3

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  • Preface

    Rio Yokota, Weigang Wu

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   10776 LNCS   V - VI   2018

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  • Preface

    Rio Yokota, Michèle Weiland, David Keyes, Carsten Trinitis

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   10876 LNCS   V - VI   2018

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  • Preface

    Rio Yokota, Michèle Weiland, John Shalf, Sadaf Alam

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   11203 LNCS   V   2018

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  • 深層学習における低精度演算を用いた高速化及びアクセラレーターの性能評価

    Hiroki Naganuma, Akira Sekiya, Kazuki Osawa, Hiroyuki Ootomo, Yuji Kuwamura, Rio Yokota

    2017.10

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  • Using Low-Rank Approximation in Convolutional Neural Networks

    Yoshifumi Motoyama, Toshio Endo, SATOSHI MATSUOKA, Rio Yokota, Keisuke Fukuda

    158th Research Presentation Seminar in High Performance Computing   2017-HPC-158 ( 25 )   2017.3

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  • 階層型行列計算のGPU向け最適化

    大島聡史, 山崎市太郎, 伊田明弘, 横田理央

    日本応用数理学会年会講演予稿集(CD-ROM)   2017   2017

  • A Matrix-free Preconditioner for the Helmholtz Equation based on the Fast Multipole Method

    Huda Ibeid, Rio Yokota, David Keyes

    2016.8

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    Fast multipole methods (FMM) were originally developed for accelerating
    $N$-body problems for particle-based methods. FMM is more than an $N$-body
    solver, however. Recent efforts to view the FMM as an elliptic Partial
    Differential Equation (PDE) solver have opened the possibility to use it as a
    preconditioner for a broader range of applications. FMM can solve Helmholtz
    problems with optimal $\mathcal{O}(N \log N)$ complexity, has compute-bound
    inner kernels, and highly asynchronous communication patterns. The combination
    of these features makes FMM an interesting candidate as a preconditioner for
    sparse solvers on architectures of the future. The use of FMM as a
    preconditioner allows us to use lower order multipole expansions than would be
    required as a solver because individual solves need not be accurate. This
    reduces the amount of computation and communication significantly and makes the
    time-to-solution competitive with state-of-the-art preconditioners.
    Furthermore, the high asynchronicity of FMM allows it to scale to much larger
    core counts than factorization-based and multilevel methods. We describe our
    tests in reproducible details with freely available codes.

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    Other Link: http://arxiv.org/pdf/1608.02461v1

  • A Matrix-Free Preconditioner for Elliptic Solvers Based on the Fast Multipole Method

    Huda Ibeid, Rio Yokota, David Keyes

    SIAM Conference on Parallel Processing for Scientific Computing   2016.4

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  • Comparison of FMM and HSS at Large Scale

    YOKOTA Rio, ROUET, Francois-Henri, LI Xiaoye

    SIAM Conference on Applied Linear Algebra   2015.10

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  • Fast Multipole Method as Preconditioner

    Huda Ibeid, Jennifer Pestana, Rio Yokota, David Keyes

    SIAM Conference on Computational Science and Engineering   2015.3

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  • Asynchronous Execution of the Fast Multipole Method Using Charm++

    Mustafa AbdulJabbar, Rio Yokota, David Keyes

    arXiv:1405.7487   2014.5

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    Fast multipole methods (FMM) on distributed mem- ory have traditionally used
    a bulk-synchronous model of com- municating the local essential tree (LET) and
    overlapping it with computation of the local data. This could be perceived as
    an extreme case of data aggregation, where the whole LET is communicated at
    once. Charm++ allows a much finer control over the granularity of
    communication, and has a asynchronous execution model that fits well with the
    structure of our FMM code. Unlike previous work on asynchronous fast N-body
    methods such as ChaNGa and PEPC, the present work performs a direct comparison
    against the traditional bulk-synchronous approach and the asynchronous approach
    using Charm++. Furthermore, the serial performance of our FMM code is over an
    order of magnitude better than these previous codes, so it is much more
    challenging to hide the overhead of Charm++.

    arXiv

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    Other Link: http://arxiv.org/abs/1405.7487v1

  • Fast Multipole Method as a Preconditioner

    IBEID Huda, YOKOTA Rio, KEYES David

    SIAM Conference on Computational Science and Engineering   2013.2

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  • Towards a Dataflow FMM using the OmpSs Programming Model

    Miquel Pericas, Abdelhalim Amer, Keisuke Fukuda, Naoya Maruyama, Rio Yokota, Satoshi Matsuoka

    研究報告ハイパフォーマンスコンピューティング(HPC)   2012 ( 12 )   1 - 7   2012.9

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    CiNii Books

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  • Parallelizing ExaFMM with MassiveThreads Task Parallel Library and Its Evaluation

    Kenjiro Taura, Jun Nakashima, Rio Yokota, Naoya Maruyama

    2012 ( 13 )   1 - 13   2012.7

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    CiNii Books

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  • Turbulence Simulation Using 4096³ Vortex Particles on 4096 GPUs

    Yokota Rio, Barba Lorena, Narumi Tetsu

    Tsubame ESJ. : e-science journal   6   17 - 22   2012.7

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  • Scaling Fast Multipole Methods up to 4000 GPUs

    YOKOTA Rio, NARUMI Tetsu, BARBA Lorena, YASUOKA Kenji

    ATIP/A*CRC Workshop on Accelerator Technologies for High Performance Computing   2012.5

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  • Mesh-free direct numerical simulation of turbulence using the vortex method on parallel MDGRAPE-3 boards along with the fast multipole method

    YOKOTA Rio, NARUMI Tetsu, YASUOKA Kenji, EBISUZAKI Toshikazu, OBI Shinnosuke

    Next-Generation Supercomputing Symposium   2007.10

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▼display all

Presentations

  • Matrices in Deep Neural Networks and How to Compute Them in Parallel Invited International conference

    Rio Yokota

    IEEE CLUSTER 2022  2022.9 

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    Event date: 2022.9

    Language:English   Presentation type:Oral presentation (keynote)  

    Venue:Heidelberg, Germany  

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  • Fast N-body Methods on Many-core and Heterogenous Systems International conference

    YOKOTA Rio

    International Workshop on Computational Science and Numerical Analysis  2012.3 

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    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Tokyo  

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  • Petaflops Scale Turbulence Simulation on TSUBAME 2.0 International conference

    YOKOTA Rio

    GPU@BU Workshop  2011.11 

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  • Large Scale Multi-GPU FMM for Bioelectrostatics International conference

    YOKOTA Rio, BARBA Lorena

    Presentations SIAM Conference on Computational Science and Engineering  2011.2 

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  • 12 Steps to a Fast Multipole Method on GPUs International conference

    YOKOTA Rio

    Pan-American Advanced Studies Institute  2011.1 

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  • RBF interpolation using Gaussians with domain decomposition on GPUs International conference

    YOKOTA Rio, BARBA Lorena

    SIAM annual meeting  2010.7 

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  • Calculation of the decay of colliding turbulent vortex rings

    4th International Conference on Vortex Flows and Vortex Models  2008 

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  • Simulation of a wake using 3-D vortex element method

    Annual Meeting of the JSME  2006 

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  • Vortex flow simulation between multipole bridge decks

    Whither Turbulence Prediction and Control  2006 

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  • Simulation of homogeneous isotropic turbulence using the vortex method,

    YOKOTA Rio, OBI Shinnosuke

    20th Symposium on Computational Fluid Dynamics  2006.12 

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  • Range of Applications for the Fast Multipole Method on GPUs International conference

    YOKOTA Rio

    Accelerated Computing  2010.1 

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  • Effect of Mixed Precision Computing on H-Matrix Vector Multiplication in BEM Analysis

    Rise Ooi, Takeshi Iwashita, Takeshi Fukaya, Akihiro Ida, Rio Yokota

    HPC Asia 2020  2020.1 

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  • Advances in Fast Multipole Methods for Scalable Electrostatics Calculations Invited International conference

    YOKOTA Rio

    Workshop: Electrostatics methods in Molecular Simulation  2013.5 

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  • ExaFMM – a Testbed for Comparing Various Implementations of the FMM International conference

    YOKOTA Rio

    SIAM Conference on Computational Science and Engineering  2015.3 

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  • Communication Complexity of the Fast Multipole Method and its Alge- braic Variants International conference

    YOKOTA Rio, KEYES David

    CBMS-NSF Conference: Fast Direct Solvers for Elliptic PDEs  2014.6 

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  • Various Implementations of FMM and Their Performance on Future Architectures International conference

    YOKOTA Rio

    Multi-resolution Interactions Workshop  2015.8 

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  • Running Fast Multipole Method on the Full Node of TSUBAME and K computer International conference

    YOKOTA Rio

    Scalable Hierarchical Algorithms for Extreme Computing  2012.4 

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  • Petascale Fast Multipole Methods on GPUs Invited International conference

    YOKOTA Rio

    The 11th International Symposium on Parallel and Distributed Computing  2012.6 

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  • Compute-Memory Tradeoff in Hierarchical Low-Rank Approximation Methods International conference

    Rio Yokota

    SIAM Conference on Computational Science and Engineering  2017.2 

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    Language:English   Presentation type:Oral presentation (general)  

    Venue:Atlanta  

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  • Energy Conservation of Fast Multipole Methods in Classical Molecular Dynamics Simulations Invited International conference

    Rio Yokota

    7th AICS International Symposium  2017.2 

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    Venue:Kobe  

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  • Hierarchical Low-Rank Approximations at Extreme Scale Invited International conference

    Rio Yokota

    32nd International Conference, ISC High Performance  2017.6 

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    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Frankfurt  

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  • A Common API for Fast Multipole Methods International conference

    YOKOTA Rio

    Accelerate Data Analytics and Computing Workshop  2016.1 

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    Language:English   Presentation type:Symposium, workshop panel (nominated)  

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  • Tuning Parameters in FMM Invited

    YOKOTA Rio

    Seventh Symposium on Automatic Tuning Technology and its Application  2015.12 

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  • Improving Data Locality of Fast Multipole Methods International conference

    YOKOTA Rio

    Third Workshop on Programming Abstractions for Data Locality  2016.10 

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    Language:English   Presentation type:Symposium, workshop panel (public)  

    Venue:Kobe  

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  • Fast Multipole Method Library for Multiple Architectures and its Application to Molecular and Fluid Simulations

    YOKOTA Rio

    8th Symposium of the Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures  2016.7 

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  • Perforamance Portability of FMM

    YOKOTA Rio

    21st Conference of Japan Computational Engineering Society  2016.5 

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  • O(N)で並列性の高い密行列のLU分解 Invited

    Rio Yokota

    2022.12 

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  • 人工画像を用いたVision Transformerの大規模事前学習 Invited

    Rio Yokota

    2022.9 

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  • 人工画像を用いたVision Transformerの大規模事前学習 Invited

    Rio Yokota

    2022.7 

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  • Scaling Deep Learning to Thousands of GPUs Invited International conference

    Rio Yokota

    HPC 2018  2018.7 

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    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Cetraro  

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  • Energy Conserving Fast Multipole Methods for the Calculation of Long-range Interactions Invited International conference

    Rio Yokota

    Mathematics in Action: Modeling and analysis in molecular biology and electro- physiology  2018.6 

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    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Suzhou  

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  • Optimization Methods for Large Scale Distributed Deep Learning Invited International conference

    Rio Yokota

    IPAM Workshop I: Big Data Meets Large-Scale Computing  2018.9 

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    Venue:Los Angeles  

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  • Early Application Results on TSUBAME 3 Invited International conference

    Rio Yokota

    Smoky Mountains Computational Sciences and Engineering Conference  2018.8 

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    Venue:Gatlinburg  

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  • Can we use Hierarchical Low-Rank Approximation for Deep Learning? Invited International conference

    Rio Yokota

    HPC Saudi 2018  2018.3 

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    Language:English   Presentation type:Oral presentation (keynote)  

    Venue:Jeddah  

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  • Recent Trends in Hierarchical Low-Rank Approximation Methods Invited International conference

    Rio Yokota

    Tokyo Institute of Technology and Stony Brook University Joint Science and Technology Meeting  2019.5 

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  • 階層的低ランク近似法の最新研究動向と応用例 Invited

    Rio Yokota

    2019.5 

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  • ImageNetベンチマークの大規模並列深層学習 Invited

    Rio Yokota

    2019.7 

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  • 深層学習の高速化と大規模並列化 Invited

    Rio Yokota

    2019.9 

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  • 深層学習に現れる密行列も構造 Invited

    Rio Yokota

    2019.10 

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  • 近似行列分解と分散深層学習 Invited

    Rio Yokota

    2019.11 

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  • Degree of Approximation and Overhead of Computing Curvature, Information, and Noise Matrices Invited International conference

    Rio Yokota

    ICML Workshop "Beyond first order methods in machine learning systems", July  2020 

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  • FMMの自動チューニング可能なパラメータについて Invited

    Rio Yokota

    2015.12 

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  • Portability of the Performance of FMM Invited

    Rio Yokota

    2016.5 

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  • Kronecker Factorization for Second Order Optimization in Deep Learning Invited International conference

    Rio Yokota

    SIAM CSE  2019.2 

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  • Overview of Distributed Memory Parallelism in Deep Learning Invited International conference

    Rio Yokota

    DD26 MS01: Learning, Algorithms, Domain Decomposition Methods, and Applications  2020.12 

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  • スパコンを用いた大規模並列分散深層学習 Invited

    Rio Yokota

    2021.3 

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  • Overview of structured low-rank approximation methods Invited International conference

    Rio Yokota

    IUTAM Symposium on Computational Methods for Large-Scale and Complex Wave Problems  2021.6 

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  • 階層的低ランク近似法に関するレビュー Invited

    Rio Yokota

    2021.9 

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  • Approximations of Natural Gradient Descent in Distributed Training Invited International conference

    Rio Yokota

    INFORMS Annual Meeting Session: Beyond first order methods in machine learning systems I  2021.10 

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  • 大規模並列深層学習の基礎 Invited

    Rio Yokota

    2021.10 

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  • 二次最適化を用いたImageNetの大規模分散深層学習 Invited

    Rio Yokota

    2020.1 

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  • 二次最適化を用いた巨大な言語モデルの学習およびFRNNを用いたプラズマ挙動予測 Invited

    Rio Yokota

    2020.2 

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  • Distributed Deep Learning with Second Order Information Invited International conference

    Rio Yokota

    SPCL_Bcast(COMM_WORLD)  2020.10 

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  • 深層学習におけるヘッセ行列, フィッシャー行列, 共分散行列の高速近似解法 Invited

    Rio Yokota

    2020.10 

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Awards

  • ACM Gordon Bell Prize (price/performance)

    2009  

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Research Projects

  • 高性能都市モデル計算

    2026 - 2029

    日本学術振興会  科学研究費助成事業  基盤研究(B)

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  • 次世代計算機の潜在能力を引き出すための科学技術ソフトウェアの刷新

    Grant number:25H01109  2025.4 - 2028.3

    日本学術振興会  科学研究費助成事業  基盤研究(A)

    横田 理央

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    Grant amount:\46020000 ( Direct Cost: \35400000 、 Indirect Cost:\10620000 )

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  • GPU教育教材の作成及び教育プログラムの実施、生成AI技術を中心としたGPU計算資源の高度活用促進

    2025 - 2030

    文部科学省  文部科学省 次世代HPC・AI開発支援拠点事業 

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  • 大規模言語モデル(LLM:Large Language Model)を活用した医薬品等の有効性・安全 性評価のためのアウトカム抽出の方法論の確立に向けた研究

    Grant number:24AC0401  2024.4 - 2027.3

    厚生労働省  厚生労働科学研究費  応用研究

    武藤 学, 松本 繁巳, 中島 貴子, 黒田 知宏, 吉原 博幸, 小林 慎治, 粂 直人, 横田 理央, 加藤 康之

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  • 低ランク構造行列法の適用範囲拡大と多様な計算アーキテクチャの活用

    Grant number:24K02949  2024.4 - 2027.3

    日本学術振興会  科学研究費助成事業  基盤研究(B)

    伊田 明弘, 横田 理央, 塙 敏博, 岩下 武史, 大島 聡史, 星野 哲也, 平石 拓, 河合 直聡

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    Grant amount:\18590000 ( Direct Cost: \14300000 、 Indirect Cost:\4290000 )

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  • 大規模言語モデルのミスアライメントに対するレッドチーミング基盤

    2024 - 2030

    科学技術振興機構  JST K-program 

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  • 大規模言語モデルの分散並列事前学習の実施に関する研究

    2024 - 2029

    科学技術振興機構  JST次世代人工知能技術等研究開発拠点形成事業 

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  • 人工生成データ及び少量実データの継続事前学習による限定資源下でのAI基盤モデル構築

    2024 - 2028

    日本学術振興会  国際共同研究加速基金  海外連携研究

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  • Next-generation high-performance linear solver for future computational science and engineering

    Grant number:23H00462  2023.4 - 2027.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (A)

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    Grant amount:\45500000 ( Direct Cost: \35000000 、 Indirect Cost:\10500000 )

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  • 深層生成モデルを活用した構成的なパターン認識・理解

    Grant number:23H00490  2023.4 - 2026.3

    日本学術振興会  科学研究費助成事業  基盤研究(A)

    篠田 浩一, 井上 中順, 横田 理央, 川上 玲, 佐藤 育郎

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    Grant amount:\47190000 ( Direct Cost: \36300000 、 Indirect Cost:\10890000 )

    本研究課題では,識別の対象(インスタンス)を属性の集合(束)とみなし,特徴量空間においてその特徴を属性ごとに分解する.そして,これらの属性特徴からインスタンスを再合成する過程で属性特徴を最適化することで,各属性を高精度で識別し,かつ,外れ値に対し頑健な識別手法を実現することを目的としている。このために深層生成モデルと高密度な属性アノテーションに基づく学習手法を開発する.従来研究の多くが対象とその属性が一対一に対応する平坦な意味構造を仮定していたのに対し,本研究は多くの属性が複雑に絡み合う対象における複数の属性を同時に識別することを可能にする.新しい属性やクラスの創発も視野に入れる.より具体的には、深層学習を用いた「合成による識別」のアプローチにより,構成的なパターン認識・理解を行う方法論を確立する.人の動作認識,話者・感情認識,マルチモーダル認識の3つのタスクで横断的に評価し,従来に比べ高い識別性能を目指す.初年度である本年度は、人の動作認識、話者・感情認識、マルチモーダル認識の各々の課題において、評価データベースの構築と、ベースライン方式の開発を行った。これらと並行して、比較的小規模なタスクで、拡散モデルなどの生成モデルを用いて識別を行う方式の開発を行った。また、ニューラル構造探索などを用いて生成モデルの効率的な学習を行う方式も開発した。特に、センサーと映像のマルチモーダル認識における基本方式の構築、およびデータベース構築、人間の歩容認識の基本方式の開発、マルチモーダル感情認識の基本方式の開発を行った。

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  • Functional improvement of mixing promotion in fluid equipment by elucidating the universal statistical law of two-phase turbulence

    Grant number:22H01403  2022.4 - 2026.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\17290000 ( Direct Cost: \13300000 、 Indirect Cost:\3990000 )

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  • Functional improvement of mixing promotion in fluid equipment by elucidating the universal statistical law of two-phase turbulence

    Grant number:23K22674  2022.4 - 2026.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\17290000 ( Direct Cost: \13300000 、 Indirect Cost:\3990000 )

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  • Fast and Accurate Eigenvalue Calculations by Hierarchical Low-rank Approximation and its Application to Large-scale Electronic Structure Calculations

    Grant number:22H03598  2022.4 - 2025.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

    Rio Yokota, Akihiro Ida, Takeshi Ogita, Takeo Hoshi

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    Authorship:Principal investigator 

    Grant amount:\17680000 ( Direct Cost: \13600000 、 Indirect Cost:\4080000 )

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  • Fast and accurate eigenvalue calculations by hierarchical low-rank approximation and its application to large-scale electronic structure calculations

    Grant number:23K24854  2022.4 - 2025.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\17680000 ( Direct Cost: \13600000 、 Indirect Cost:\4080000 )

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  • A New Bayes Duality Principle for Adaptive, Robust, Life-long Learning of AI

    Grant number:JY210177nn  2021.10 - 2027.3

    JST  CREST 

    Emtiyaz Khan, Kenichi Bannai, Rio Yokota, Julyan Arbel

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    Authorship:Coinvestigator(s) 

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  • Construction of numerical linear algebra based on lattice H-matrices and its high-performance implementation on modern architectures

    Grant number:21H03447  2021.4 - 2024.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\17290000 ( Direct Cost: \13300000 、 Indirect Cost:\3990000 )

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  • Application of Unconventional Linear Algebra Techniques to Continuous Learning in Supergiant Neural Networks

    Grant number:20K20624  2020.7 - 2023.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Challenging Research (Pioneering)  Grant-in-Aid for Challenging Research (Pioneering)

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    Grant amount:\25350000 ( Direct Cost: \19500000 、 Indirect Cost:\5850000 )

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  • Life-Long Deep Learning using Bayesian Principles

    Grant number:20H04247  2020.4 - 2023.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\18200000 ( Direct Cost: \14000000 、 Indirect Cost:\4200000 )

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  • Linear Solvers for Machine Learning Hardware

    Grant number:18H03248  2018.4 - 2021.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

    Yokota Rio

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    Grant amount:\16900000 ( Direct Cost: \13000000 、 Indirect Cost:\3900000 )

    The trend in computer architecture has now shifted from general purpose accelerators to specialized hardware for machine learning. The present work focuses on the affinity between hierarchical low-rank approximation methods, and low-precision arithmetic units and tensor product accelerators in machine learning processors to develop a suitable linear algebra library for future architectures. In FY2018, we ported our H-matrix library to use batched MAGMA operations in order to take advantage of the tensor product accelerators. In FY2019, we optimized the inner kernels of the H-matrix by making use of TensorCores. In FY2020, we extended this work to recover the accuracy when using TensorCores and measured the energy efficiency.

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  • Enhancement of H-matrix library and optimization for next generation supercomputers

    Grant number:17H01749  2017.4 - 2020.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

    Ida Akihiro

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    Grant amount:\18850000 ( Direct Cost: \14500000 、 Indirect Cost:\4350000 )

    In this study, we enhanced the HACApK, which is a library for H-matrices: the dynamic load balancing technique is introduced for H-matrix generation, and algorithms of H-matrix-vector multiplication for GPU computing and mixed-precision computing are developed and implemented. These new implementations are several to ten times faster than existing HACApK. We proposed a novel variant of low-rank structured matrices, called “lattice H-matrices”, which allow the construction of efficient operation and communication patterns compared to the conventional H-matrices. In numerical experiments for performing H-matrix-vector multiplications, the lattice H-matrices is several tens of times faster than the normal H-matrices when several thousand processes are used. Moreover, we developed an LU decomposition method based on the lattice H-matrices, and a QR decomposition method for the BLR matrices which is a simple version of lattice H-matrices. We also proposed their parallelization algorithms.

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  • Acceleration and economization of deep learning algorithms for image processing in social infrastructure

    2016.11 - 2022.3

    Japan Science and Technology Agency  CREST 

    SHINODA Koichi

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    Grant type:Competitive

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  • 性能と生産性を両立するエクサスケールコンピュータ向け階層型粒子法フレームワーク

    Grant number:16H02827  2016.4 - 2019.3

    日本学術振興会  科学研究費助成事業 基盤研究(B)  基盤研究(B)

    丸山 直也, 横田 理央, 田浦 健次朗

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    Grant amount:\16900000 ( Direct Cost: \13000000 、 Indirect Cost:\3900000 )

    今日のペタスケールシステムの千倍の性能を目指したエクサスケールスーパーコンピュータでは、計算機アーキテクチャの質的および量的な変化が不可避であり、それに従って既存のアプリケーションの大幅な書き換えが必須となる。本研究では頻出基本数値計算手法である粒子法に着目し、アーキテクチャの変更の度にアプリケーションを変更することなく高性能を達成可能なソフトウェア基盤技術を確立することを目的として研究開発を進めた。これは、アーキテクチャ非依存にアプリケーション開発が可能なプログラミングフレームワークに基づき、並列化および性能最適化を自動化することを狙ったものである。今年度は本フレームワークの第一版としてCPUおよびGPUに対応したフレームワークを開発した。本フレームワークはC++テンプレートメタプログラミングに基づき、FMM等の階層的粒子法を簡便に記述可能なプログラミングモデルを提供する。ユーザプログラムはテンプレート展開によってCPU用の並列コードやCUDAを用いたGPU用コードへと自動的に変換されるため、対象プロセッサ用に別途プログラムを作成する必要がない。また、MPIを用いた複数ノード向け並列化もフレームワークによって自動的になされるため、単一のユーザプログラムによって単一プロセッサからスーパーコンピュータクラスの大規模システムまで統一的に動作させることが可能である。また、本フレームワークの実装には高性能を達成するためにFMMアルゴリズムの高性能実装技術に関する研究成果や軽量マルチスレッドランタイムであるMassiveThreadsが活用されており、人手による実装に近い性能が自動的に達成できている。

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  • Grant-in-Aid for Scientific Research (B)

    2016.4 - 2019.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research 

    MARUYAMA Naoya

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    Grant type:Competitive

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  • Large scale iterative solvers by combining FMM and H-matrices

    Grant number:16H05859  2016.4 - 2018.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (A)  Grant-in-Aid for Young Scientists (A)

    Yokota Rio, Li Xiaoye S., Keyes David E.

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    Grant amount:\6630000 ( Direct Cost: \5100000 、 Indirect Cost:\1530000 )

    In FY2016, we extended the FMM to H-matrices and developed a LU decomposition code using H-matrices. The dual tree traversal of exaFMM was used to determine the block cluster tree for arbitrary admissibility conditions, which allowed tasked based parallelization of the compression part of the H-matrix code. In FY2017, we further optimized inner kernels of the H-matrix code and compared H-matrices with multigrid for real applications. The use of batched MAGMA enabled us to maximize the performance of GPUs even for small matrices. The advantage of H-matrices over multigrid depends on the condition number of the matrix, while the H-matrix becomes advantageous as the degree of parallelism increases.

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  • Grant-in-Aid for Encouragement of Young Scientists (A)

    2016.4 - 2018.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research 

    YOKOTA Rio

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    Authorship:Principal investigator  Grant type:Competitive

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  • Grant-in-Aid for Research Activity start-up

    2015.8 - 2017.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research 

    YOKOTA Rio

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  • エクサスケーラブルな大規模連立一次方程式の前処理としてのFMMの代数学的拡張

    Grant number:15H06196  2015.8 - 2016.3

    日本学術振興会  科学研究費助成事業 研究活動スタート支援  研究活動スタート支援

    横田 理央

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    Grant amount:\1430000 ( Direct Cost: \1100000 、 Indirect Cost:\330000 )

    次世代計算機上で既に性能が出ると分かっている階層的 N 体アルゴリズムを出発点にとり,それを任意の連立一次方程式を扱えるソルバへと徐々に拡張した.平成27年度には,Poisson 方程式しか解くことのできない現在の FMM を Helmholtz 方程式や Stokes 方程式へと拡張し,流体解析のみならず構造・電磁場・音響解析へも適用できるようにした。また、それぞれの方程式を同等の計算条件,計算機環境の下で multigrid 法やHSS行列と直接比較し,いままでやられてこなかった手法間の定量的な優位性の評価を行った.Multigrid 法との比較においては Poisson 方程式に比べ Helmholtz 方程式は FMM の優位性が顕著であった.これは Helmholtz 方程式が高周波を含む場合に multigrid 法の収束性が著しく低下するのに対して,FMM の収束性がさほど低下しないことが原因である.HSS行列との比較ではセットアップのオーバーヘッドが小さい FMM が HSS に比べて合計の計算時間で有利になるという結果が得られた.特に2次元 Laplace 方程式においてその差は顕著で FMM が約1000倍高速であった.スケーラビリティのベンチマークにおいては FMM は Cray XC40 の 131,072 コアを用いた計算で良好な並列化効率が得られ,4000億点規模の計算を数秒で行うことができた.これは,FMM の計算としては世界最大規模であり,最速の計算でもあると思われる.

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Teaching Experience

  • 高性能科学技術計算

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  • 計算機ネットワーク

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  • 5th Academic Group Literacy

    Institution:Tokyo Institute of Technology, School of Computing, Department of Computer Science

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  • High Performance Scientific Computing

    Institution:Tokyo Institute of Technology, School of Computing, Department of Computer Science

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  • Computer Networks

    Institution:Tokyo Institute of Technology, School of Computing, Department of Computer Science

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  • 5類リテラシ

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Media Coverage

  • “Japan-specific LLMs Are Absolutely Necessary”: A Supercomputer Researcher Pursues Open AI Models Internet

    Nikkei xTECH  Nikkei xTECH  online  2023.7

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  • Alarm over Japan Falling Behind in Domestic Generative AI Newspaper, magazine

    Nikkei (The Nikkei)  Nikkei (The Nikkei)  morning edition, page 2  2023.6

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  • Growing Participation in Japanese Homegrown Generative AI Newspaper, magazine

    Yomiuri Shimbun  Yomiuri Shimbun  morning edition, page 10  2023.6

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  • Tokyo Tech and Others to Develop Domestic Generative AI Newspaper, magazine

    Nikkei Sangyo Shimbun  Nikkei Sangyo Shimbun  page 7  2023.6

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  • Pioneering Text-Generating AI with a Domestic Model Newspaper, magazine

    Nikkei (The Nikkei)  Nikkei (The Nikkei)  morning edition, page 14  2023.5

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  • Toward the Development of a Japanese Homegrown Conversational AI: Tokyo Tech, RIKEN, and Others Newspaper, magazine

    Asahi Shimbun  Asahi Shimbun  morning edition, page 27  2023.5

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  • Japanese Homegrown Generative AI on Fugaku Newspaper, magazine

    Nikkei (The Nikkei)  Nikkei (The Nikkei)  morning edition, page 1  2023.5

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  • Developing an LLM on Fugaku Newspaper, magazine

    Nikkan Kogyo Shimbun  Nikkan Kogyo Shimbun  morning edition, page 23  2023.5

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  • Toward Developing Domestic Generative AI on the Fugaku Supercomputer Newspaper, magazine

    Tokyo Shimbun  Tokyo Shimbun  morning edition, page 2  2023.5

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  • Toward Developing Domestic Generative AI Technology Using Fugaku Newspaper, magazine

    Mainichi Shimbun  Mainichi Shimbun  morning edition, page 18  2023.5

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  • Japanese-Language AI Development Begins This Month Newspaper, magazine

    Yomiuri Shimbun  Yomiuri Shimbun  morning edition, page 29  2023.5

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  • Domestic Generative AI on Fugaku Newspaper, magazine

    Sankei Shimbun  Sankei Shimbun  morning edition, page 2  2023.5

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  • Developing Japanese-Language AI on Fugaku Newspaper, magazine

    Yomiuri Shimbun  Yomiuri Shimbun  evening edition, page 10  2023.5

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