2026/06/30 更新

写真a

コバタケ エイリ
小畠 英理
KOBATAKE EIRY
所属
生命理工学院 教授
職名
教授
外部リンク

News & Topics
  • さまざまな材料表面を生理活性に 人工合成した接着性成長因子

    2021/07/01

    掲載言語: 日本語

      詳細を見る

    理化学研究所(理研)創発物性科学研究センター創発生体工学材料研究チームの多田誠一研究員、伊藤嘉浩チームリーダー(開拓研究本部伊藤ナノ医工学研究室主任研究員)と東京工業大学生命理工学院生命理工学系の小畠英理教授らの共同研究グループ※は、貝が分泌する水中接着タンパク質に含まれる翻訳後修飾アミノ酸[用語1

  • 生体親和性の高いナノ粒子が血管を通じて薬剤を輸送

    2010/01/05

    掲載言語: 日本語

      詳細を見る

    本学大学院生命理工学研究科生命情報専攻の小畠英理准教授を中心とする研究グループは,タンパク質を材料とするナノオーダーの微小な粒子状の構造体を開発した.血管を通じて薬剤を効率的に輸送するシステム(ドラッグ・デリバリ・システム)を実現するための重要な開発成果である.


News & Media

研究キーワード

  • 融合タンパク質

  • バイオテクノロジー

  • 蛋白質

  • カルシウム・イオン

  • 遺伝子工学

  • ルシフェラーゼ

  • プロテインA

  • タンパク質

  • バイオセンシング

  • 生物生体工学

  • 一酸化窒素

  • ヒスタミン

  • 疎水性相互作用

  • RNA解析

  • 自己集合

  • インテリジェント材料

  • 細胞機能制御

  • エラスチン

  • 構造変化

  • 生体機能分子プローグ

  • EGF

  • インテリジェント・デバイス

  • ナノ粒子

  • 人工タンパク質

  • RGD配列

  • 分子集積

  • ARM-ペフチド

  • タンパク質材料

  • 生物機能工学

研究分野

  • ナノテク・材料 / 構造材料、機能材料

  • ナノテク・材料 / 高分子材料

  • 情報通信 / 生命、健康、医療情報学

  • ライフサイエンス / 生体材料学

  • ものづくり技術(機械・電気電子・化学工学) / バイオ機能応用、バイオプロセス工学

  • ナノテク・材料 / ナノバイオサイエンス

  • ライフサイエンス / 生体医工学

  • ナノテク・材料 / ナノ材料科学

▼全件表示

経歴

  • 東京科学大学   生命理工学院   教授

    2024年10月 - 現在

      詳細を見る

  • 東京工業大学   生命理工学院   教授

    2016年4月 - 2024年9月

      詳細を見る

  • 東京工業大学   総合理工学研究科(研究院)   教授

    2012年 - 2015年

      詳細を見る

論文

  • ssDNA Modification on Lipid Carriers Utilizing ssDNA-Conjugated Fusion Protein with Cholesterol-Binding Ability. 国際誌

    Kei Nishida, Nami Oba, Eiry Kobatake, Masayasu Mie

    Bioconjugate chemistry   37 ( 6 )   1270 - 1279   2026年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1021/acs.bioconjchem.6c00186

    Web of Science

    PubMed

    researchmap

  • Injectability of temperature-responsive hydrogel derived from elastin-like polypeptide for cell delivery.

    Mutawakil Al Muqadasi, Keitaro Ii, Kei Nishida, Masayasu Mie, Eiry Kobatake

    Journal of bioscience and bioengineering   140 ( 5 )   350 - 356   2025年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.jbiosc.2025.08.003

    Web of Science

    PubMed

    researchmap

  • Magnetic Cell Separation Based on Protein Nanoparticles Mediating the Interaction between Magnetic Particles and Target Cells. 査読 国際誌

    Kei Nishida, Gaoyang Wang, Eiry Kobatake, Masayasu Mie

    ACS applied bio materials   8 ( 2 )   1126 - 1137   2025年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1021/acsabm.4c01450

    Web of Science

    PubMed

    researchmap

  • Biointerface engineering through amalgamation of gene technology and site-specific growth factor conjugation for efficient osteodifferentiation. 査読 国際共著 国際誌

    Zhenxu Wu, Li Mo, Zongliang Wang, Liangsong Song, Eiry Kobatake, Yoshihiro Ito, Yi Wang, Peibiao Zhang

    Biotechnology and bioengineering   122 ( 1 )   80 - 94   2025年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1002/bit.28852

    Web of Science

    PubMed

    researchmap

  • Cholesterol- and ssDNA-binding fusion protein-mediated DNA tethering on the plasma membrane. 査読 国際誌

    Kei Nishida, Minon Ishizuka, Eiry Kobatake, Masayasu Mie

    Biomaterials science   13 ( 1 )   299 - 309   2024年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1039/d4bm01127a

    Web of Science

    PubMed

    researchmap

  • Functional decoration of elastin-like polypeptides-based nanoparticles with a modular assembly via isopeptide bond formation. 査読 国際誌

    Jun Yamaguchi, Kei Nishida, Eiry Kobatake, Masayasu Mie

    Biotechnology letters   47 ( 1 )   6 - 6   2024年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1007/s10529-024-03549-1

    Web of Science

    PubMed

    researchmap

  • Polysarcosine-Coated liposomes attenuating immune response induction and prolonging blood circulation. 査読 国際誌

    Mingxin Hu, Kazuaki Taguchi, Kazuaki Matsumoto, Eiry Kobatake, Yoshihiro Ito, Motoki Ueda

    Journal of colloid and interface science   651   273 - 283   2023年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.jcis.2023.07.149

    Web of Science

    PubMed

    researchmap

  • Sensitive Detection of Tumor Cells Using Protein Nanoparticles with Multiple Displays of DNA Aptamers and Bioluminescent Reporters. 査読 国際共著 国際誌

    Kei Nishida, Gaoyang Wang, Eiry Kobatake, Masayasu Mie

    ACS biomaterials science & engineering   9 ( 9 )   5260 - 5269   2023年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1021/acsbiomaterials.3c00712

    Web of Science

    PubMed

    researchmap

  • Construction of protein nanoparticles for targeted delivery of drugs to cancer cells

    Eiry Kobatake, Yusuke Ikeda, Masayasu Mie

    MATERIALS ADVANCES   3 ( 15 )   6262 - 6269   2022年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1039/d2ma00419d

    Web of Science

    researchmap

  • Detection of SARS-CoV-2 by antigen ELISA test is highly swayed by viral load and sample storage condition. 査読 国際共著 国際誌

    Nihad Adnan, Shahad Saif Khandker, Ahsanul Haq, Mousumi Akter Chaity, Abdul Khalek, Anawarul Quader Nazim, Taku Kaitsuka, Kazuhito Tomizawa, Masayasu Mie, Eiry Kobatake, Sohel Ahmed, Nor Azlina A Ali, Mohib Ullah Khondoker, Mainul Haque, Mohd Raeed Jamiruddin

    Expert review of anti-infective therapy   20 ( 3 )   473 - 481   2022年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1080/14787210.2021.1976144

    Web of Science

    PubMed

    researchmap

  • Development of an enhanced immunoassay based on protein nanoparticles displaying an IgG-binding domain and luciferase. 国際誌

    Gaoyang Wang, Yasumasa Mashimo, Eiry Kobatake, Masayasu Mie

    Analytical and bioanalytical chemistry   414 ( 6 )   2079 - 2088   2022年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1007/s00216-021-03842-2

    Web of Science

    PubMed

    researchmap

  • Antibody response to the first dose of AZD1222 vaccine in COVID-19 convalescent and uninfected individuals in Bangladesh. 国際誌

    Raeed Jamiruddin, Ahsanul Haq, Mohib Ullah Khondoker, Tamanna Ali, Firoz Ahmed Md, Shahad Saif Khandker, Irfan Jawad, Rubel Hossain, Sohel Ahmed, Sabita Rezwana Rahman, Mamun Mustafi, Taku Kaitsuka, Masayasu Mie, Kazuhito Tomizawa, Eiry Kobatake, Mainul Haque, Nihad Adnan

    Expert review of vaccines   20 ( 12 )   1651 - 1660   2021年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1080/14760584.2021.1977630

    Web of Science

    PubMed

    researchmap

  • Versatile Mitogenic and Differentiation-Inducible Layer Formation by Underwater Adhesive Polypeptides. 国際誌

    Seiichi Tada, Xueli Ren, Hongli Mao, Yun Heo, Shin-Hye Park, Takashi Isoshima, Liping Zhu, Xiaoyue Zhou, Reiko Ito, Shino Kurata, Megumi Osaki, Eiry Kobatake, Yoshihiro Ito

    Advanced science (Weinheim, Baden-Wurttemberg, Germany)   8 ( 16 )   e2100961   2021年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1002/advs.202100961

    Web of Science

    PubMed

    researchmap

  • Longitudinal Antibody Dynamics Against Structural Proteins of SARS-CoV-2 in Three COVID-19 Patients Shows Concurrent Development of IgA, IgM, and IgG. 国際誌

    Mohd Raeed Jamiruddin, Md Ahsanul Haq, Kazuhito Tomizawa, Eiry Kobatake, Masayasu Mie, Sohel Ahmed, Shahad Saif Khandker, Tamanna Ali, Nowshin Jahan, Mumtarin Jannat Oishee, Mohib Ullah Khondoker, Bijon Kumar Sil, Mainul Haque, Nihad Adnan

    Journal of inflammation research   14   2497 - 2506   2021年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.2147/JIR.S313188

    Web of Science

    PubMed

    researchmap

  • AuNP Coupled Rapid Flow-Through Dot-Blot Immuno-Assay for Enhanced Detection of SARS-CoV-2 Specific Nucleocapsid and Receptor Binding Domain IgG. 国際誌

    Bijon Kumar Sil, Mohd Raeed Jamiruddin, Md Ahsanul Haq, Mohib Ullah Khondoker, Nowshin Jahan, Shahad Saif Khandker, Tamanna Ali, Mumtarin Jannat Oishee, Taku Kaitsuka, Masayasu Mie, Kazuhito Tomizawa, Eiry Kobatake, Mainul Haque, Nihad Adnan

    International journal of nanomedicine   16   4739 - 4753   2021年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.2147/IJN.S313140

    Web of Science

    PubMed

    researchmap

  • Development and performance evaluation of a rapid in-house ELISA for retrospective serosurveillance of SARS-CoV-2. 国際誌

    Bijon Kumar Sil, Nowshin Jahan, Md Ahsanul Haq, Mumtarin Jannat Oishee, Tamanna Ali, Shahad Saif Khandker, Eiry Kobatake, Masayasu Mie, Mohib Ullah Khondoker, Mohd Raeed Jamiruddin, Nihad Adnan

    PloS one   16 ( 2 )   e0246346   2021年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1371/journal.pone.0246346

    Web of Science

    PubMed

    researchmap

  • Conjugation of biphenyl groups with poly(ethylene glycol) to enhance inhibitory effects on the PD-1/PD-L1 immune checkpoint interaction. 国際誌

    Eun-Hye Kim, Boyang Ning, Masuki Kawamoto, Hideyuki Miyatake, Eiry Kobatake, Yoshihiro Ito, Jun Akimoto

    Journal of materials chemistry. B   8 ( 44 )   10162 - 10171   2020年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1039/d0tb01729a

    Web of Science

    PubMed

    researchmap

  • Construction of an Enzymatically-Conjugated DNA Aptamer-Protein Hybrid Molecule for Use as a BRET-Based Biosensor

    Masayasu Mie, Rena Hirashima, Yasumasa Mashimo, Eiry Kobatake

    APPLIED SCIENCES-BASEL   10 ( 21 )   2020年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.3390/app10217646

    Web of Science

    researchmap

  • Thermally Induced Switch of Coupling Reaction Using the Morphological Change of a Thermoresponsive Polymer on a Reactive Heteroarmed Nanoparticle. 国際誌

    So Jung Park, Jun Akimoto, Naoki Sakakibara, Eiry Kobatake, Yoshihiro Ito

    ACS applied materials & interfaces   12 ( 43 )   49165 - 49173   2020年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Control of the cross-linking reaction is imperative when developing a sophisticated in situ forming hydrogel in the body. In this study, a heteroarmed thermoresponsive (TR) nanoparticle was designed to investigate the mechanism of controlling reactivity of the functional groups introduced into the nanoparticles. The coupling reaction was suppressed/proceeded by utilizing temperature-induced morphological changes of the TR polymer. The heteroarmed TR nanoparticle was prepared by the coassembly of amphiphilic block copolymers possessing both a TR segment and hydrophilic segment with reactive functional groups of succinimide. The longer TR chain on the nanoparticle covered the succinimide group and suppressed the reaction with the primary amine on the external nanoparticle. In contrast, the coupling reaction was promoted at a high temperature to create the chemical cross-linking structure between the nanoparticles because of the exposure of the succinimide group on the surface of the particle as a consequence of the morphological change of the TR polymer. In addition, the thermally controlled chemical reaction modulated initiation of the gelation using a highly concentrated nanoparticle solution. The heteroarmed TR nanoparticle offers great practical advantages for clinical uses, such as embolization agents, through precise control of the reaction.

    DOI: 10.1021/acsami.0c12875

    PubMed

    researchmap

  • Direct visualization of the extracellular binding structure of E-cadherins in liquid. 国際誌

    Teiko Shibata-Seki, Masato Nagaoka, Mitsuaki Goto, Eiry Kobatake, Toshihiro Akaike

    Scientific reports   10 ( 1 )   17044 - 17044   2020年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1038/s41598-020-72517-2

    Web of Science

    PubMed

    researchmap

  • Synthesis of Photoreactive Poly(ethylene oxide)s for Surface Modification. 国際誌

    Jun Akimoto, So Jung Park, Sei Obuse, Masuki Kawamoto, Mika Tamura, Avanashiappan Nandakumar, Eiry Kobatake, Yoshihiro Ito

    ACS applied bio materials   3 ( 9 )   5941 - 5947   2020年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1021/acsabm.0c00628

    Web of Science

    PubMed

    researchmap

  • Construction of multifunctional fusion proteins with a laminin-derived short peptide to promote neural differentiation of mouse induced pluripotent stem cells. 国際誌

    Afroza Sharmin, Nihad Adnan, Amranul Haque, Yasumasa Mashimo, Masayasu Mie, Eiry Kobatake

    Journal of biomedical materials research. Part B, Applied biomaterials   108 ( 6 )   2691 - 2698   2020年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    There is growing interest in the functional roles of the extracellular matrix (ECM) in regulating the fate of pluripotent stem cells (PSCs). An artificially bioengineered ECM provides an excellent model for studying the molecular mechanisms underlying self-renewal and differentiation of PSCs, without multiple unknown and variable factors associated with natural substrates. Here, we have engineered multifunctional fusion proteins that are based on peptides from laminin, including p20, RGD, and elastin-like polypeptide (ELP), where laminin peptides work as cell adhesion molecules (CAMs) and ELP to promote anchorage. The functionality of these chimeric proteins, referred to as ERE-p20 and E-p20, was assessed by determining their ability to immobilize cells on a hydrophobic polystyrene surface, improve mouse induced pluripotent stem cells (miPSCs) attachment, and promote miPSC differentiation to neural progenitors. ERE-p20 and E-p20 proteins showed hydrophobic binding saturation to the polystyrene plates around 500 nM (2.39 μg/cm2 ) and 750 nM (2.27 μg/cm2 ) protein concentrations, respectively. The apparent maximum cell binding to ERE-p20 and E-p20 was approximately 81% and 73%, respectively, relative to gelatin. For neural precursors, neurite outgrowth was enhanced by the presence of RGD and p20 peptides. The expression levels of neuronal marker protein MAP2 were upregulated approximately 2.5-fold and threefold by ERE-p20 and E-p20, respectively, relative to laminin. Overall, we have shown that elastin-mimetic fusion proteins consisting of p20 with and without RGD peptides are able to induce neuronal differentiation. In conclusion, our newly designed bioengineered fusion proteins allow preparation of specific bioactive matrices or coating/scaffold for miPSCs differentiation.

    DOI: 10.1002/jbm.b.34600

    PubMed

    researchmap

  • Preparation of Biphenyl-Conjugated Bromotyrosine for Inhibition of PD-1/PD-L1 Immune Checkpoint Interactions. 国際誌

    Eun-Hye Kim, Masuki Kawamoto, Roopa Dharmatti, Eiry Kobatake, Yoshihiro Ito, Hideyuki Miyatake

    International journal of molecular sciences   21 ( 10 )   2020年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Cancer immunotherapy has been revolutionized by the development of monoclonal antibodies (mAbs) that inhibit interactions between immune checkpoint molecules, such as programmed cell-death 1 (PD-1), and its ligand PD-L1. However, mAb-based drugs have some drawbacks, including poor tumor penetration and high production costs, which could potentially be overcome by small molecule drugs. BMS-8, one of the potent small molecule drugs, induces homodimerization of PD-L1, thereby inhibiting its binding to PD-1. Our assay system revealed that BMS-8 inhibited the PD-1/PD-L1 interaction with IC50 of 7.2 μM. To improve the IC50 value, we designed and synthesized a small molecule based on the molecular structure of BMS-8 by in silico simulation. As a result, we successfully prepared a biphenyl-conjugated bromotyrosine (X) with IC50 of 1.5 μM, which was about five times improved from BMS-8. We further prepared amino acid conjugates of X (amino-X), to elucidate a correlation between the docking modes of the amino-Xs and IC50 values. The results suggested that the displacement of amino-Xs from the BMS-8 in the pocket of PD-L1 homodimer correlated with IC50 values. This observation provides us a further insight how to derivatize X for better inhibitory effect.

    DOI: 10.3390/ijms21103639

    PubMed

    researchmap

  • Construction of DNA-displaying nanoparticles by enzymatic conjugation of DNA and elastin-like polypeptides using a replication initiation protein. 国際誌

    Wei Guo, Yasumasa Mashimo, Eiry Kobatake, Masayasu Mie

    Nanotechnology   31 ( 25 )   255102 - 255102   2020年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DNA-displaying nanoparticles comprised of conjugates of single-stranded DNA (ssDNA) and elastin-like polypeptide (ELP) were developed. ssDNA was enzymatically conjugated to ELPs via a catalytic domain of Porcine Circovirus type 2 replication initiation protein (pRep) fused to ELPs. Nanoparticles were formed upon heating to temperatures above the phase transition temperature due to the hydrophobicity of ELPs and the hydrophilicity of conjugated ssDNA. We demonstrated the applicability of the resultant nanoparticles as drug carriers with tumor-targeting properties by conjugating a DNA aptamer, which is known to bind to Mucin 1 (MUC1), to ELPs. DNA aptamer-displaying nanoparticles encapsulating the anti-cancer drug paclitaxel were able to bind to cells overexpressing MUC1 and induce cell death.

    DOI: 10.1088/1361-6528/ab8042

    PubMed

    researchmap

  • Direct Labeling of Protein Nanoparticles with Fluorescent Compounds for Immunoassay Applications. 国際誌

    Tsutomu Sugihara, Masayasu Mie, Eiry Kobatake

    Analytical sciences : the international journal of the Japan Society for Analytical Chemistry   36 ( 3 )   385 - 387   2020年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A fusion protein, designated ELP-D-C, comprised of a hydrophobic elastin-like polypeptide unit, a hydrophilic aspartic acid-rich peptide unit, and an antibody-binding domain as a functional unit, was constructed. Upon heat induction, ELP-D-C forms micellar nanoparticles displaying antibody-binding domains on their surfaces. The protein nanoparticles were able to incorporate hydrophobic fluorescent compounds and subsequently detect target molecules via antibody binding by the resulting fluorescence intensity, which was proportional to the log of the concentration of the target molecule.

    DOI: 10.2116/analsci.19N024

    PubMed

    researchmap

  • Temperature-Responsive Multifunctional Protein Hydrogels with Elastin-like Polypeptides for 3-D Angiogenesis. 国際誌

    Yoshinori Mizuguchi, Yasumasa Mashimo, Masayasu Mie, Eiry Kobatake

    Biomacromolecules   21 ( 3 )   1126 - 1135   2020年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Supramolecular protein hydrogels with tunable properties represent promising candidates for advanced designer extracellular matrices (ECMs). To control cellular functions, ECMs should be able to spatiotemporally regulate synergistic signaling between transmembrane receptors and growth factor (GF) receptors. In this study, we developed genetically engineered temperature-responsive multifunctional protein hydrogels. The designed hydrogel was fabricated by combining the following four peptide blocks: thermosensitive elastin-like polypeptides (ELPs), a polyaspartic acid (polyD) chain to control aggregation and delivery of GFs, a de novo-designed helix peptide that forms antiparallel homotetrameric coiled-coils, and a biofunctional peptide. The resultant coiled-coil unit bound ELPs (CUBEs) exhibit a controllable sol-gel transition with tunable mechanical properties. CUBEs were functionalized with bone sialoprotein-derived RGD (bRGD), and human umbilical vein endothelial cells (HUVECs) were three-dimensionally cultured in bRGD-modified CUBE (bRGD-CUBE) hydrogels. Proangiogenic activity of HUVECs was promoted by bRGD. Moreover, heparin-binding angiogenic GFs were immobilized to bRGD-CUBEs via electrostatic interactions. HUVECs cultured in GF-tethered bRGD-CUBE hydrogels formed three-dimensional (3-D) tubulelike structures. The designed CUBE hydrogels may demonstrate utility as advanced smart biomaterials for biomedical applications. Further, the protein hydrogel design strategy may provide a novel platform for constructing designer 3-D microenvironments for specific cell types.

    DOI: 10.1021/acs.biomac.9b01496

    PubMed

    researchmap

  • Construction of DNA-NanoLuc luciferase conjugates for DNA aptamer-based sandwich assay using Rep protein. 国際誌

    Masayasu Mie, Takahiro Niimi, Yasumasa Mashimo, Eiry Kobatake

    Biotechnology letters   41 ( 3 )   357 - 362   2019年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    OBJECTIVE: We developed a DNA-NanoLuc luciferase (NnaoLuc) conjugates for DNA aptamer-based sandwich assay using the catalytic domain of the replication initiator protein derived from porcine circovirus type 2 (pRep). RESULTS: For construction of DNA aptamer and NanoLuc conjugate using the catalytic domain of Rep from PCV2. pRep fused to NanoLuc was genetically constructed and expressed in E. coli. After purification, the activities of fused pRep and NanoLuc were evaluated, and DNA-NanoLuc conjugates were constructed via the fused pRep. Finally, constructed DNA-NanoLuc conjugates were applied for use in a DNA aptamer-based sandwich assay. Here, pRep was used not only for conjugation of the NanoLuc to the detection aptamer, but also for immobilization of the capture aptamer on the plate surface. CONCLUSION: We have demonstrated that DNA-NanoLuc conjugates via the catalytic domain of PCV2 Rep could be applied for DNA aptamer-based sandwich assay system.

    DOI: 10.1007/s10529-018-02641-7

    PubMed

    researchmap

  • Development of drug-loaded protein nanoparticles displaying enzymatically-conjugated DNA aptamers for cancer cell targeting. 国際誌

    Masayasu Mie, Rie Matsumoto, Yasumasa Mashimo, Anthony E G Cass, Eiry Kobatake

    Molecular biology reports   46 ( 1 )   261 - 269   2019年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Modification of protein-based drug carriers with tumor-targeting properties is an important area of research in the field of anticancer drug delivery. To this end, we developed nanoparticles comprised of elastin-like polypeptides (ELPs) with fused poly-aspartic acid chains (ELP-D) displaying DNA aptamers. DNA aptamers were enzymatically conjugated to the surface of the nanoparticles via genetic incorporation of Gene A* protein into the sequence of the ELP-D fusion protein. Gene A* protein, derived from bacteriophage ϕX174, can form covalent complexes with single-stranded DNA via the latter's recognition sequence. Gene A* protein-displaying nanoparticles exhibited the ability to deliver the anticancer drug paclitaxel (PTX), whilst retaining activity of the conjugated Gene A* protein. PTX-loaded protein nanoparticles displaying DNA aptamers known to bind to the MUC1 tumor marker resulted in increased cytotoxicity with MCF-7 breast cancer cells compared to PTX-loaded protein nanoparticles without the DNA aptamer modification.

    DOI: 10.1007/s11033-018-4467-2

    PubMed

    researchmap

  • Fabrication of a Multiplexed Artificial Cellular MicroEnvironment Array 査読 国際誌

    Yasumasa Mashimo, Momoko Yoshioka, Yumie Tokunaga, Christopher Fockenberg, Shiho Terada, Yoshie Koyama, Teiko Shibata-Seki, Koki Yoshimoto, Risako Sakai, Hayase Hakariya, Li Liu, Toshihiro Akaike, Eiry Kobatake, Siew-Eng How, Motonari Uesugi, Yong Chen, Ken-ichiro Kamei

    Journal of Visualized Experiments   ( 139 )   2018年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:MyJove Corporation  

    Cellular microenvironments consist of a variety of cues, such as growth factors, extracellular matrices, and intercellular interactions. These cues are well orchestrated and are crucial in regulating cell functions in a living system. Although a number of researchers have attempted to investigate the correlation between environmental factors and desired cellular functions, much remains unknown. This is largely due to the lack of a proper methodology to mimic such environmental cues in vitro, and simultaneously test different environmental cues on cells. Here, we report an integrated platform of microfluidic channels and a nanofiber array, followed by high-content single-cell analysis, to examine stem cell phenotypes altered by distinct environmental factors. To demonstrate the application of this platform, this study focuses on the phenotypes of self-renewing human pluripotent stem cells (hPSCs). Here, we present the preparation procedures for a nanofiber array and the microfluidic structure in the fabrication of a Multiplexed Artificial Cellular MicroEnvironment (MACME) array. Moreover, overall steps of the single-cell profiling, cell staining with multiple fluorescent markers, multiple fluorescence imaging, and statistical analyses, are described.

    DOI: 10.3791/57377

    PubMed

    researchmap

  • A DNA-scaffold platform enhances a multi-enzymatic cycling reaction. 国際誌

    Yasumasa Mashimo, Masayasu Mie, Eiry Kobatake

    Biotechnology letters   40 ( 4 )   667 - 672   2018年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    OBJECTIVE: We explored the co-localization of multiple enzymes on a DNA backbone via a DNA-binding protein, Gene-A* (A*-tag) to increase the efficiency of cascade enzymatic reactions. RESULTS: Firefly luciferase (FLuc) and pyruvate orthophosphate dikinase (PPDK) were genetically fused with A*-tag and modified with single-stranded (ss) DNA via A*-tag. The components were assembled on ssDNA by hybridization, thereby enhancing the efficiency of the cascading bioluminescent reaction producing light emission from pyrophosphate. The activity of A*-tag in each enzyme was investigated with dye-labeled DNA. Co-localization of the enzymes via hybridization was examined using a gel shift assay. The multi-enzyme complex showed significant improvement in the overall efficiency of the cascading reaction in comparison to a mixture of free enzymes. CONCLUSION: A*-tag is highly convenient for ssDNA modification of versatile enzymes, and it can be used for construction of functional DNA-enzyme complexes.

    DOI: 10.1007/s10529-018-2517-4

    PubMed

    researchmap

  • Application of elastin-based nanoparticles displaying antibody binding domains for a homogeneous immunoassay. 国際誌

    Tsutomu Sugihara, Masayasu Mie, Eiry Kobatake

    Analytical biochemistry   544   72 - 79   2018年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Nanoparticles are small size-controlled particles from 1 to 100 nm diameters and characterized by their structure, base material and functional units displayed on their surfaces. In this study, protein-based nanoparticles composed of a hydrophobic elastin-like peptide unit, a hydrophilic aspartic acid-rich peptide unit and displaying antibody binding domains on their surfaces, were designed and genetically synthesized. The constituent fusion proteins, termed ELP-D-C, were found to exist in monomeric form (ELP-D-C/monomer) at low temperature. Above the phase transition temperature, however, ELP-D-C was found to rapidly self-assemble to form spherical micelles (ELP-D-C/micelle) with a hydrophobic core and diameters of ∼40 nm. Furthermore, ELP-D-C/micelle were shown to display antibody binding domains on their surfaces, which allowed for immobilization of antibodies and subsequent formation of large, visually detectable complexes in the presence of target molecule (antigen), whose sizes increased in proportion to the target molecule concentration. The observed target molecule concentration-dependent complex formation suggests that ELP-D-C/micelle may be useful as base particles in applications such as homogeneous turbidity immunoassays.

    DOI: 10.1016/j.ab.2017.12.023

    PubMed

    researchmap

  • Design of bFGF-tethered self-assembling extracellular matrix proteins via coiled-coil triple-helix formation. 国際誌

    Yoshinori Mizuguchi, Yasumasa Mashimo, Masayasu Mie, Eiry Kobatake

    Biomedical materials (Bristol, England)   12 ( 4 )   045021 - 045021   2017年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Self-assembling peptides are attractive materials for tissue engineering applications because of their functionality including high biocompatibility and biodegradability. Modification of self-assembling peptides with functional motifs, such as the cell-adhesive tripeptide sequence RGD leads to functional artificial extracellular matrices (ECMs). In this study, we developed an artificial self-assembling ECM protein tethered with a growth factor via heterotrimer triple-helix (helix A/B/C) formation. The helix A and helix C peptides, which are capable of forming a heterodimer coiled-coil structure, were fused to both ends of a matrix protein composed of the elastin-derived structural unit (APGVGV)12 with an RGD motif. The helix B peptide, which constituents the third helix of the triple-helix structure, was fused with basic fibroblast growth factor (bFGF) for tethering to the artificial ECM proteins. Each recombinant protein exhibited cell adhesion and cell proliferation activities similar to the original, while the designed bFGF-tethered ECM protein exhibited superior cell proliferation activity. These results demonstrate that the approach of creating growth factor-tethered self-assembling proteins via triple-helix formation can be applied to develop functional ECMs for tissue engineering applications.

    DOI: 10.1088/1748-605X/aa7616

    PubMed

    researchmap

  • Fluorescent and luminescent fusion proteins for analyses of amyloid beta peptide aggregation. 国際誌

    Kenji Usui, Masayasu Mie, Takashi Andou, Hisakazu Mihara, Eiry Kobatake

    Journal of peptide science : an official publication of the European Peptide Society   23 ( 7-8 )   659 - 665   2017年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The amyloid beta (Aβ) peptide is regarded as a causative agent of Alzheimer's disease. In this study, fluorescent and luminescent fusion proteins were constructed to analyze Aβ aggregation. A system was developed to monitor changes in luminescence that provides information about Aβ aggregation. In the presence of monomeric Aβ, the fusion protein exhibits higher luminescence intensity, and the luminescence intensity is diminished after aggregation of the fusion protein and Aβ. In contrast, the fluorescence is sustained in the presence of Aβ. In the absence of Aβ, the fusion protein self-aggregates, and its luminescence and fluorescence are quenched, thus decreasing the background fluorescence and enhancing the detection of Aβ inside and outside the cells. The ratio of the luminescence intensity to the fluorescence intensity would allow the aggregation degrees of Aβ to be distinguished. This study would be a promising method for analyzing the aggregation state of a particular amyloid protein/peptide (monomer, oligomer, or fibril), as well as the distribution of the amyloid protein/peptide within and at the cell surface, by using a single fusion protein. Copyright © 2017 European Peptide Society and John Wiley & Sons, Ltd.

    DOI: 10.1002/psc.3003

    PubMed

    researchmap

  • Microfluidic-Nanofiber Hybrid Array for Screening of Cellular Microenvironments 査読 国際誌

    Ken-ichiro Kamei, Yasumasa Mashimo, Momoko Yoshioka, Yumie Tokunaga, Christopher Fockenberg, Shiho Terada, Yoshie Koyama, Minako Nakajima, Teiko Shibata-Seki, Li Liu, Toshihiro Akaike, Eiry Kobatake, Siew-Eng How, Motonari Uesugi, Yong Chen

    SMALL   13 ( 18 )   2017年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1002/smll.201603104

    Web of Science

    PubMed

    researchmap

  • Design of luciferase-displaying protein nanoparticles for use as highly sensitive immunoassay detection probes. 国際誌

    Yusuke Ikeda, Yasumasa Mashimo, Masayasu Mie, Eiry Kobatake

    The Analyst   141 ( 24 )   6557 - 6563   2016年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    In this study, we developed a protein nanoparticle-based immunoassay to detect cancer biomarkers using a bioluminescent fusion protein. This method relies on the use of protein nanoparticles comprised of genetically-engineered elastin-like polypeptides (ELPs) fused with poly-aspartic acid tails (ELP-D), previously developed in our lab. The sizes of the self-assembled ELP-D nanoparticles can be regulated at the nanoscale by charged repulsion of the poly-aspartic acid chains. To improve the sensitivity of enzyme-linked immunosorbent assays (ELISAs), we herein demonstrate the multivalent display of NanoLuc® (Nluc) luciferase and a biotin acceptor peptide (BAP) on the surfaces of ELP-D nanoparticles, and demonstrate the sensitivity of these multivalent nanoparticles as detection probes. The fusion protein comprised of ELP-D and Nluc-BAP (ELP-D-Nluc-BAP) was found to form nanoparticles with Nluc and BAP displayed multivalently on their surfaces. Moreover, the use of the nanoparticles in ELISA resulted in a detection sensitivity for α-fetoprotein (AFP) about 10 times higher than that of an assay relying on the use of the monomeric version of the fusion protein. Taken together, ELP-D-based nanoparticles displaying multivalent luciferases on their surfaces enable the construction of an ELISA with enhanced sensitivity.

    PubMed

    researchmap

  • Development of a Split SNAP-CLIP Double Labeling System for Tracking Proteins Following Dissociation from Protein-Protein Complexes in Living Cells. 国際誌

    Masayasu Mie, Tatsuhiko Naoki, Eiry Kobatake

    Analytical chemistry   88 ( 16 )   8166 - 71   2016年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The split SNAP-tag protein-fragment complementation assay (PCA) is a useful tool for imaging protein-protein interactions (PPIs) in living cells. In contrast to conventional methods employed for imaging PPIs, the split SNAP-tag PCA enables tracking of proteins following dissociation from protein-protein complexes. A limitation of this system, however, is that it only allows for labeling and tracking of one of the proteins forming the protein-protein complex. To track both proteins forming a protein-protein complex, each protein needs to be appropriately labeled. In this study, a split SNAP-CLIP double labeling system is developed and applied for tracking of each protein forming a protein-protein complex. As a proof-of concept, FM protein for PPIs and protein kinase C alpha (PKCα) for translocation are introduced to a split SNAP-CLIP double labeling system. The results show a split SNAP-CLIP double labeling system enables labeling of both proteins in a protein-protein complex and subsequent tracking of each of the proteins following dissociation from the protein-protein complexes in living cells.

    DOI: 10.1021/acs.analchem.6b01906

    PubMed

    researchmap

  • Construction of a Defined Biomimetic Matrix for Long-Term Maintenance of Mouse Induced Pluripotent Stem Cells. 国際誌

    Nihad Adnan, Masayasu Mie, Amranul Haque, Sharif Hossain, Yasumasa Mashimo, Toshihiro Akaike, Eiry Kobatake

    Bioconjugate chemistry   27 ( 7 )   1599 - 605   2016年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The existing in vitro culture systems often use undefined and animal-derived components for the culture of pluripotent stem cells. Artificial bioengineered peptides have the potential to become alternatives to these components of extracellular matrix (ECM). Integrins and cadherins are two cell adhesion proteins important for stem cell self-renewal, differentiation, and phenotype stability. In the present study, we sought to mimic the physico-biochemical properties of natural ECMs that allow self-renewal of mouse induced pluripotent stem cells (iPSCs). We develop a genetically engineered ECM protein (ERE-CBP) that contains (i) an integrin binding peptide sequence (RGD/R), (ii) an E-/N-cadherin binding peptide sequence (SWELYYPLRANL/CBP), and (iii) 12 repeats of APGVGV elastin-like polypeptides (ELPs/E).While ELPs allow efficient coating by binding to nontreated hydrophobic tissue culture plates, RGD/R and CBP support integrin- and cadherin-dependent cell attachment, respectively. Mouse iPSCs on this composite matrix exhibit a more compact phenotype compared to cells on control gelatin substrate. We also demonstrated that the ERE-CBP supports proliferation and long-term self-renewal of mouse iPSCs for up to 17 passages without GSK3β (CHIR99021) and Erk (PD0325901) inhibitors. Overall, our engineered ECM protein, which is cost-effective to produce in prokaryotic origin and flexible to modify with other cell adhesion peptides or growth factors, provides a novel approach for expansion of mouse iPSCs in vitro.

    DOI: 10.1021/acs.bioconjchem.6b00141

    PubMed

    researchmap

  • Construction of a tissue-specific transcription factor-tethered extracellular matrix protein via coiled-coil helix formation. 国際誌

    SokeLee Siew, Mami Kaneko, Masayasu Mie, Eiry Kobatake

    Journal of materials chemistry. B   4 ( 14 )   2512 - 2518   2016年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Tissue-specific transcription factors are key regulators of cellular differentiation. Previously, we succeeded in introducing basic helix-loop-helix tissue-specific transcription factor proteins into cells to induce cellular differentiation. Based on these results, we decided to focus on the use of tissue-specific transcription factor proteins in the construction of biomaterials. In this proof-of-concept study, we demonstrate the construction of a tissue-specific transcription factor-tethered extracellular matrix protein. Here, the tissue-specific transcription factor Olig2 was tethered to a designed artificial extracellular matrix protein via coiled-coil helix formation. Tethered Olig2 was introduced into mouse embryonic carcinoma P19 cells attached to our designed extracellular matrix protein, and was shown to exhibit the ability to induce neural differentiation.

    DOI: 10.1039/c5tb01579k

    PubMed

    researchmap

  • Growth Factor Tethering to Protein Nanoparticles via Coiled-Coil Formation for Targeted Drug Delivery. 国際誌

    Yasmine Assal, Yoshinori Mizuguchi, Masayasu Mie, Eiry Kobatake

    Bioconjugate chemistry   26 ( 8 )   1672 - 7   2015年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Protein-based nanoparticles are attractive carriers for drug delivery because they are biodegradable and can be genetically designed. Moreover, modification of protein-based nanoparticles with cell-specific ligands allows for active targeting abilities. Previously, we developed protein nanoparticles comprising genetically engineered elastin-like polypeptides (ELPs) with fused polyaspartic acid tails (ELP-D). Epidermal growth factor (EGF) was displayed on the surface of the ELP-D nanoparticles via genetic design to allow for active cell-targeting abilities. Herein, we focused on the coiled-coil structural motif as a means for noncovalent tethering of growth factor to ELP-D. Specifically, two peptides known to form a heterodimer via a coiled-coil structural motif were fused to ELP-D and single-chain vascular endothelial growth factor (scVEGF121), to facilitate noncovalent tethering upon formation of the heterodimer coiled-coil structure. Drug-loaded growth factor-tethered ELP-Ds were found to be effective against cancer cells by provoking cell apoptosis. These results demonstrate that tethering growth factor to protein nanoparticles through coiled-coil formation yields a promising biomaterial candidate for targeted drug delivery.

    DOI: 10.1021/acs.bioconjchem.5b00266

    PubMed

    researchmap

  • Tracking a protein following dissociation from a protein-protein complex using a split SNAP-tag system. 国際誌

    Masayasu Mie, Tatsuhiko Naoki, Eiry Kobatake

    Analytical biochemistry   477   53 - 5   2015年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Protein-protein interactions (PPIs) are important for various biological processes in living cells. Several methods have been developed for the visualization of PPIs in vivo; however, these methods are unsuitable for visualization of post-PPI events such as dissociation and translocation. In this study, we applied a split SNAP-tag system for the visualization of post-PPI events. This method enabled tracking of the protein following dissociation from the protein-protein complex. Thus, the split SNAP-tag system should prove to be a useful tool for visualization of post-PPI events.

    DOI: 10.1016/j.ab.2015.02.019

    PubMed

    researchmap

  • Solubilization of single-walled carbon nanotubes using a peptide aptamer in water below the critical micelle concentration. 国際誌

    Zha Li, Tomoshi Kameda, Takashi Isoshima, Eiry Kobatake, Takeshi Tanaka, Yoshihiro Ito, Masuki Kawamoto

    Langmuir : the ACS journal of surfaces and colloids   31 ( 11 )   3482 - 8   2015年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The solubilizing ability of single-walled carbon nanotubes (SWCNTs) in water with several dispersants was investigated. Among the dispersants, including low-molecular-weight surfactants, peptides, DNA, and a water-soluble polymer, the peptide aptamer, A2 (IFRLSWGTYFS), exhibited the highest dispersion capability below the critical micelle concentration at a concentration of 0.02 w/v%. The dispersion of supernatant aqueous solution of SWCNTs containing aptamer A2 was essentially unchanged for several months after high-speed ultracentrifugation and gave rise to an efficient and stable dispersion of the SWCNTs in water. From the results of isothermal titration calorimetry and molecular dynamics simulations, the effective binding capability of A2 was due to π-π interaction between aromatic groups in the peptide aptamer and the side walls of SWCNTs. Interestingly, the peptide aptamer showed the possibility of diameter separation of semiconducting SWCNTs using a uniform density gradient ultracentrifuge. These phenomena are encouraging results toward an effective approach to the dispersion and separation of SWCNTs.

    DOI: 10.1021/la504777b

    PubMed

    researchmap

  • AFM characterization of chemically treated corneal cells. 国際誌

    Teiko Shibata-Seki, Kazuki Tajima, Hiroki Takahashi, Hiroya Seki, Junji Masai, Hiroshi Goto, Eiry Kobatake, Toshihiro Akaike, Norihiko Itoh

    Analytical and bioanalytical chemistry   407 ( 9 )   2631 - 5   2015年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We present a characterization of chemically treated cells using atomic force microscopy (AFM) which can observe changes in morphology and elasticity of cells. Since AFM has the significant advantage that it does not require fixation of samples, the method is simple and can capture various properties of living cells. In this study, corneal epithelial and endothelial cells were examined. The topography images of the corneal cells without glutaraldehyde (GA) fixation were successfully obtained. The images showed a natural three-dimensional shape of these cells, which scanning electron microscope (SEM) images could not provide. The AFM images of GA-fixed cells were taken and compared with a SEM image reported in the literature. Our results show that longer time for GA fixation makes the surface of the corneal endothelial tissue stiffer. Also, longer treatment results in relatively large structural variation in samples. Combined with conventional histochemical methods, this approach helps us gain an overall understanding of the influence of such chemical treatment.

    DOI: 10.1007/s00216-015-8473-0

    PubMed

    researchmap

  • Assembly of zinc finger motif-fused enzymes on a dsDNA scaffold for catalyzing consecutive reactions with a proximity effect. 査読 国際誌

    Funabashi Hisakage, Yanagi Satoshi, Suzuki Shigeya, Mie Masayasu, Kobatake Eiry

    Biotechnology Letters   37 ( 1 )   109 - 114   2015年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :The feasibility of assembling enzymes, catalyzing consecutive reactions, on to a double-stranded DNA (dsDNA) scaffold utilizing zinc finger motifs is described. The catalytic activities of two zinc finger motif-fused enzymes catalyzing a bioluminescence reaction with energy recycling, namely pyruvate phosphate dikinase and firefly luciferase, have been evaluated. Bioluminescence measurements with dsDNA scaffolds coding a different distance between the binding sites for each zinc finger motif-fused enzyme confirmed the effect of the distance, proving the proximity effect of ATP recycling presumed to be the result of efficient intermediate diffusion. Thus, fusion to zinc finger motifs offers a promising option for the assembly of bi-enzymes, catalyzing a consecutive reaction, onto a dsDNA scaffold with a proximity effect.

    DOI: 10.1007/s10529-014-1644-9

    PubMed

    researchmap

  • An Engineered N-Cadherin Substrate for Differentiation, Survival, and Selection of Pluripotent Stem Cell-Derived Neural Progenitors. 国際誌

    Amranul Haque, Nihad Adnan, Ali Motazedian, Farhima Akter, Sharif Hossain, Koichi Kutsuzawa, Kakon Nag, Eiry Kobatake, Toshihiro Akaike

    PloS one   10 ( 8 )   e0135170   2015年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    For stem cell-based treatment of neurodegenerative diseases a better understanding of key developmental signaling pathways and robust techniques for producing neurons with highest homogeneity are required. In this study, we demonstrate a method using N-cadherin-based biomimetic substrate to promote the differentiation of mouse embryonic stem cell (ESC)- and induced pluripotent stem cell (iPSC)-derived neural progenitor cells (NPCs) without exogenous neuro-inductive signals. We showed that substrate-dependent activation of N-cadherin reduces Rho/ROCK activation and β-catenin expression, leading to the stimulation of neurite outgrowth and conversion into cells expressing neural/glial markers. Besides, plating dissociated cells on N-cadherin substrate can significantly increase the differentiation yield via suppression of dissociation-induced Rho/ROCK-mediated apoptosis. Because undifferentiated ESCs and iPSCs have low affinity to N-cadherin, plating dissociated cells on N-cadherin-coated substrate increase the homogeneity of differentiation by purging ESCs and iPSCs (~30%) from a mixture of undifferentiated cells with NPCs. Using this label-free cell selection approach we enriched differentiated NPCs plated as monolayer without ROCK inhibitor. Therefore, N-cadherin biomimetic substrate provide a powerful tool for basic study of cell-material interaction in a spatially defined and substrate-dependent manner. Collectively, our approach is efficient, robust and cost effective to produce large quantities of differentiated cells with highest homogeneity and applicable to use with other types of cells.

    DOI: 10.1371/journal.pone.0135170

    PubMed

    researchmap

  • Drug Delivery Using Novel Biological and Synthetic Materials. 国際誌

    Yoshihiro Ito, Eiry Kobatake, Jun Li, Seung-Wuk Lee

    BioMed research international   2015   682578 - 682578   2015年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1155/2015/682578

    PubMed

    researchmap

  • Delivery of bFGF for Tissue Engineering by Tethering to the ECM. 国際誌

    Chawapun Suttinont, Yasumasa Mashimo, Masayasu Mie, Eiry Kobatake

    BioMed research international   2015   208089 - 208089   2015年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Delivery of growth factors to target cells is an important subject in tissue engineering. Towards that end, we have developed a growth factor-tethered extracellular matrix (ECM). Here, basic fibroblast growth factor (bFGF) was tethered to extracellular matrix noncovalently. The designed ECM was comprised of 12 repeats of the APGVGV peptide motif derived from elastin as a stable structural unit and included the well-known cell adhesive RGD peptide as an active functional unit. To bind bFGF to the ECM, an acidic amino acid-rich sequence was introduced at the C-terminus of the ECM protein. It consisted of 5 repeats of 4 aspartic acids and a serine, DDDDS. bFGF has a highly basic amino acid domain. Therefore, bFGF was tethered to the ECM protein by electrostatic interaction. Cells cultured on bFGF-tethered ECM were well attached to the ECM and induced proliferation without addition of soluble bFGF.

    DOI: 10.1155/2015/208089

    PubMed

    researchmap

  • Targeting of EGF-displayed protein nanoparticles with anticancer drugs. 国際誌

    Rie Matsumoto, Rieko Hara, Takashi Andou, Masayasu Mie, Eiry Kobatake

    Journal of biomedical materials research. Part B, Applied biomaterials   102 ( 8 )   1792 - 8   2014年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The development of protein-based carriers for drug delivery has been well studied. We previously constructed a protein-based nanoparticle consisting of genetically engineered elastin-like polypeptides (ELPs) with a fused poly-aspartic acid tail (ELPD ). The size of the self-assembled ELPD nanoparticles was regulated by charged repulsion of the poly-aspartic acid chains. In the present study, epidermal growth factor (EGF) was genetically fused to the C-terminus of ELPD to impart an active targeting ability to the ELPD nanoparticles. We examined the nanoparticle formation with EGF as well as its targeting ability. ELPD with fused EGF was found to form nanoparticles that displayed multivalent EGFs on their surface. EGF-displayed nanoparticles loaded with the anti-cancer drug paclitaxel were internalized into cells overexpressing the EGF receptor, and induced cell death.

    DOI: 10.1002/jbm.b.33162

    PubMed

    researchmap

  • Cellular differentiation assessments by measuring the degree of cellular internalization and membrane adsorption using designed peptides. 国際誌

    Kenji Usui, Takuya Kikuchi, Kunio Kikuchi, Masayasu Mie, Eiry Kobatake, Hisakazu Mihara

    Bioorganic & medicinal chemistry letters   24 ( 17 )   4129 - 31   2014年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We demonstrate examples of cellular differentiation assessments, including cellular neurite outgrowth and fat cell maturation, by measuring the degree of membrane adsorption or cellular internalization using designed peptides. Because changes in the cellular membrane and cytosol during differentiation were shown to influence membrane adsorption and cellular internalization, we could successfully evaluate the extent of differentiation simply like stain indicators.

    DOI: 10.1016/j.bmcl.2014.07.053

    PubMed

    researchmap

  • In vitro selection of peptide aptamers using a ribosome display for a conducting polymer.

    Zha Li, Takanori Uzawa, Haichao Zhao, Shyh-Chyang Luo, Hsiao-hua Yu, Eiry Kobatake, Yoshihiro Ito

    Journal of bioscience and bioengineering   117 ( 4 )   501 - 3   2014年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Ribosome display was used to select peptide aptamers from a random library composed of hydrophilic amino acids for a conducting polymer, poly(3-hexylthiophene-2,5-diyl). Binding of aptamers was measured by quartz crystal microbalance, and the secondary structure of the peptide was investigated by circular dichroism.

    DOI: 10.1016/j.jbiosc.2013.10.005

    PubMed

    researchmap

  • Construction of a bFGF-tethered multi-functional extracellular matrix protein through coiled-coil structures for neurite outgrowth induction. 国際誌

    Masayasu Mie, Shoichi Sasaki, Eiry Kobatake

    Biomedical materials (Bristol, England)   9 ( 1 )   015004 - 015004   2014年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    In this study, an artificial multi-functional extracellular matrix (ECM) protein, tethered with a growth factor, was developed for neurite outgrowth induction. The designed ECM protein was comprised of an elastin-like peptide, as a structural unit, as well as the AG73 peptide sequence derived from the laminin and the C3 peptide sequence, which binds to neural cell adhesion molecules (derived from a synthetic peptide library) as functional units. Both AG73 and C3 have been demonstrated to promote cell adhesion and enhance neurite outgrowth. For the tethering of basic fibroblast growth factor (bFGF) to the ECM protein, helical peptides were fused to the ECM protein to form a coiled-coil helical structure with helical peptide-fused bFGF. Neurite outgrowth was induced in the PC12 cells that were cultured on this ECM protein as a result of the tethered-bFGF. Moreover, neurite outgrowth was enhanced by the AG73 and C3 peptides of the ECM protein.

    DOI: 10.1088/1748-6041/9/1/015004

    PubMed

    researchmap

  • Development of a specific siRNA delivery system into HeLa cells using an IgG-binding fusion protein. 国際誌

    JooYoun Bae, Masayasu Mie, Eiry Kobatake

    Biotechnology letters   35 ( 12 )   2081 - 9   2013年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Stable carriers are required for delivering siRNA to cells. The use of polyethyleneimine (PEI) as gene carrier has been researched extensively; however, it does not provide sufficient protection from RNase degradation and is not suitable for targeted siRNA delivery to specific cells. In this study, two repeats of Fc binding domain of protein G (C2) were used to introduce a specific antibody to PEI-based carrier of siRNA. In addition, we used the double-stranded RNA binding domain (DRBD) that can bind to siRNA. The complex, consisting of PEI, siRNA and constructed fusion protein, TrxC2DRBD including C2 and DRBD domains, could protect siRNA from RNase degradation. Furthermore, cell specific siRNA delivery into HeLa cells could be performed by the complex fusion with specific antibodies via C2 domain.

    DOI: 10.1007/s10529-013-1299-y

    PubMed

    researchmap

  • Systematic screening of the cellular uptake of designed alpha-helix peptides. 国際誌

    Kenji Usui, Takuya Kikuchi, Masayasu Mie, Eiry Kobatake, Hisakazu Mihara

    Bioorganic & medicinal chemistry   21 ( 9 )   2560 - 7   2013年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The cellular penetration (CP) activity of functional molecules has attracted significant attention as one of the most promising new approaches for drug delivery. In particular, cell-penetrating peptides (CPPs) have been studied extensively in cellular engineering. Because there have been few large-scale systematic studies to identify peptide sequences with optimal CP activity or that are suitable for further applications in cell engineering, such as cell-specific penetration and cell-selective culture, we screened and compared the cellular uptake (CU) activity of 54 systematically designed α-helical peptides in HeLa cells. Furthermore, the CU activity of 24 designed peptides was examined in four cell lines using a cell fingerprinting technique and statistical approaches. The CU activities in various cells depended on amino acid residues of peptide sequences as well as charge, α-helical content and hydrophobicity of the peptides. Notably, the mutation of a single residue significantly altered the CU ability of a peptide, highlighting the variability of cell uptake mechanisms. Moreover, these results demonstrated the feasibility of cell-selective culture by conducting cell-selective permeation and death in cultures containing two cell types. These studies may lead to further peptide library design and screening for new classes of CPPs with useful functions.

    DOI: 10.1016/j.bmc.2013.02.030

    PubMed

    researchmap

  • The promotion of angiogenesis by growth factors integrated with ECM proteins through coiled-coil structures. 国際誌

    Yasmine Assal, Masayasu Mie, Eiry Kobatake

    Biomaterials   34 ( 13 )   3315 - 23   2013年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    An appropriate method to bind extracellular matrix (ECM) proteins and growth factors using advanced protein engineering techniques has the potential to enhance cell proliferation and differentiation for tissue regeneration and repair. In this study we developed a method to co-immobilize non-covalently an ECM protein to three different types of growth factors: basic fibroblast growth factor (bFGF), epidermal growth factor (EGF) and single-chain vascular endothelial growth factor (scVEGF121) through a coiled-coil structure formed by helixA/helixB in order to promote angiogenesis. The designed ECM was established by fusing two repeats of elastin-derived unit (APGVGV)(12), cell-adhesive sequence (RGD), laminin-derived IKVAV sequence and collagen-binding domain (CBD) to obtain CBDEREI2. HelixA was fused to each growth factor and helixB to the engineered ECM. Human umbilical vein endothelial cells (HUVECs) were cultured on engineered ECM and growth factors connected through the coiled-coil formation between helixA and helixB. Cell proliferation and capillary tube-like formation were monitored. Moreover, the differentiated cells with high expression of Ang-2 suggested the ECM remodeling. Our approach of non-covalent coupling method should provide a protein-release control system as a new contribution in biomaterial for tissue engineering field.

    DOI: 10.1016/j.biomaterials.2013.01.067

    PubMed

    researchmap

  • Selection of DNA aptamers with affinity for pro-gastrin-releasing peptide (proGRP), a tumor marker for small cell lung cancer. 国際誌

    Masayasu Mie, Tetsuro Kai, Thao Le, Anthony E G Cass, Eiry Kobatake

    Applied biochemistry and biotechnology   169 ( 1 )   250 - 5   2013年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Aptamers are single-strand oligonucleotides that are generated by the systemic evolution of ligands by exponential enrichment (SELEX) technique and that can bind to target molecules specifically. However, only a few aptamers have been developed to date against tumor markers. To utilize aptamers for tumor diagnosis, a variety of aptamers are required. Here, a single-stranded DNA aptamer specific for pro-gastrin-releasing peptide (proGRP), a marker for small cell lung cancer, was selected using SELEX. After selection, identical sequences were found in the DNA library. This sequence was selected and its binding affinity to proGRP was evaluated using surface plasmon resonance.

    DOI: 10.1007/s12010-012-9956-5

    PubMed

    researchmap

  • In vitro selection of peptide aptamers with affinity to single-wall carbon nanotubes using a ribosome display. 国際誌

    Zha Li, Takanori Uzawa, Takashi Tanaka, Akira Hida, Koji Ishibashi, Hiromichi Katakura, Eiry Kobatake, Yoshihiro Ito

    Biotechnology letters   35 ( 1 )   39 - 45   2013年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A ribosome display from a diverse random library was applied for selecting peptide aptamers with high binding affinity to single-wall carbon nanotubes (SWCNTs). The selected peptide aptamer bound to and solubilized SWCNTs more strongly than did the peptide aptamer selected by a phage display method reported previously, and more strongly than other commonly used organic surfactants. The fluorescence spectrum of this aptamer showed a red shift upon interaction with SWCNTs but circular dichroism spectroscopy did not show any significant difference between the presence or absence of SWCNT binding.

    DOI: 10.1007/s10529-012-1049-6

    PubMed

    researchmap

  • Targeted gene delivery via PEI complexed with an antibody. 国際誌

    Joo Youn Bae, Masayasu Mie, Eiry Kobatake

    Applied biochemistry and biotechnology   168 ( 8 )   2184 - 90   2012年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Stable carriers are required for gene delivery. The use of polyethyleneimine (PEI) has been researched extensively; however, it is not suitable for targeted gene delivery to specific cells. To provide a targeting ability of the specific antibody to PEI, two repeats of Fc-binding domain of protein G (C2) were utilized. The constructed protein containing C2 could bind to a specific antibody and form a larger complex with plasmid DNA/PEI complex. The specific antibody to cell surface protein was bound to the complex through the use of C2 domain, and it was added to cells. As the result, the efficient expression of delivered reporter gene could be realized.

    DOI: 10.1007/s12010-012-9928-9

    PubMed

    researchmap

  • Aptamer-based protein detection using a bioluminescent fusion protein. 国際誌

    Farhima Akter, Masayasu Mie, Eiry Kobatake

    The Analyst   137 ( 22 )   5297 - 301   2012年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    An aptamer-based sandwich-type immunoassay is presented to detect human thrombin using a bioluminescent fusion protein, SSB-fLuc. Escherichia coli single-stranded DNA binding protein (SSB) is used as a linker between the aptamer and firefly luciferase (fLuc). For proof-of-principle, thrombin was used as the test analyte and thrombin aptamer as the sensing probe. In this fusion protein, both the SSB and the fLuc parts retained their biological activities after expression and purification. The SSB fragment of the fusion protein also had the thrombin aptamer binding ability either alone or in combination with thrombin as a triplex, which was confirmed by gel mobility shift assay using native polyacrylamide gels. The fusion protein can be used to detect thrombin in the nanomolar range. The present study thus demonstrates an aptamer-based bioluminescent assay that is simple and cost effective, and at the same time eliminates the need for labeling of either analytes or aptamers. This biomolecular detection scheme can be extended to the detection of a wide range of analytes.

    DOI: 10.1039/c2an35596e

    PubMed

    researchmap

  • Genetic PEGylation 査読 国際誌

    Seiichi Tada, Takashi Andou, Takehiro Suzuki, Naoshi Dohmae, Eiry Kobatake, Yoshihiro Ito

    PLOS ONE   7 ( 11 )   e49235   2012年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1371/journal.pone.0049235

    Web of Science

    PubMed

    researchmap

  • Induction of motor neuron differentiation by transduction of Olig2 protein. 国際誌

    Masayasu Mie, Mami Kaneko, Fumiaki Henmi, Eiry Kobatake

    Biochemical and biophysical research communications   427 ( 3 )   531 - 6   2012年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Olig2 protein, a member of the basic helix-loop-helix transcription factor family, was introduced into the mouse embryonic carcinoma cell line P19 for induction of motor neuron differentiation. We show that Olig2 protein has the ability to permeate the cell membrane without the addition of a protein transduction domain (PTD), similar to other basic helix-loop-helix transcription factors such as MyoD and NeuroD2. Motor neuron differentiation was evaluated for the elongation of neurites and the expression of choline acetyltransferase (ChAT) mRNA, a differentiation marker of motor neurons. By addition of Olig2 protein, motor neuron differentiation was induced in P19 cells.

    DOI: 10.1016/j.bbrc.2012.09.090

    PubMed

    researchmap

  • Development of a split SNAP-tag protein complementation assay for visualization of protein-protein interactions in living cells. 国際誌

    Masayasu Mie, Tatsuhiko Naoki, Kentaro Uchida, Eiry Kobatake

    The Analyst   137 ( 20 )   4760 - 5   2012年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A split SNAP-tag protein complementation assay was developed for visualization of protein-protein interactions in living cells. Split SNAP-tagμs, fragments of divided SNAP-tag between amino acid residues 91 and 92, were fused to proteins that can interact with each other. After incubation with a fluorescent SNAP-tag substrate, cells that expressed split SNAP-tag fusion proteins generated fluorescent signals when these proteins interacted. Moreover, by combination with the split CLIP-tag (SNAP-tag mutant), simultaneous labeling was achieved. This split SNAP-tag labeling method should be a useful tool for visualization of protein-protein interaction processes.

    DOI: 10.1039/c2an35762c

    PubMed

    researchmap

  • Construction of multi-functional extracellular matrix proteins that inhibits migration and tube formation of endothelial cells. 国際誌

    Makiko Nakamura, Masayasu Mie, Makoto Nakamura, Eiry Kobatake

    Biotechnology letters   34 ( 8 )   1571 - 7   2012年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Artificial extracellular matrix (ECM) proteins have been designed that have strong cell-adhesive activity and active functional units that inhibit network formation among vascular endothelial cells. A laminin-derived sequence (YIGSR) that blocks migration of vascular endothelial cells was designed to incorporate into an elastin-derived structural unit. The designed ECM fusion protein also had a cell-adhesive RGDN sequence that conferred an intense migration-inhibitory effect. The resultant ECM showed cell-adhesive activity superior to that of the synthetic YIGSR peptide and it blocked the migration of vascular endothelial cells. Furthermore, the designed ECM inhibited the angiogenic activity of a collagen gel. The engineering strategy of designing multi-functional ECM proteins could be applied to support novel tissue engineering techniques.

    DOI: 10.1007/s10529-011-0788-0

    PubMed

    researchmap

  • Construction of semisynthetic DNA-protein conjugates with Phi X174 Gene-A* protein. 国際誌

    Yasumasa Mashimo, Hitomi Maeda, Masayasu Mie, Eiry Kobatake

    Bioconjugate chemistry   23 ( 6 )   1349 - 55   2012年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DNA-protein conjugates have frequently been used as versatile molecular tools for a variety of applications in biotechnology to harness synergistic effects of DNA and protein functions. With applications for DNA-protein conjugates growing, easy-to-use and economical methods for the synthesis of DNA-protein conjugates are required. In this study, we developed a method for site-specific labeling of single-stranded DNA (ssDNA) to a recombinant protein of interest (POI) through the Gene-A* protein (Gene-A*) from bacteriophage phi X174, without any chemical modifications of ssDNA. Gene-A* protein is an enzyme that site-selectively cleaves an oligodeoxyribonucleotide (ODN) containing a Gene-A* recognition sequence, at which point a tyrosine residue of Gene-A* is bonded to the 5'-phosphoryl group of the cleavage site via a stable phosphotyrosine linkage. Here, we constructed three kinds of recombinant proteins fused to Gene-A*: N-terminally Gene-A*-fused enhanced green fluorescent protein (EGFP), C-terminally Gene-A*-fused EGFP, and N-terminally Gene-A*-fused firefly luciferase (FLuc). The reaction yields of DNA-protein conjugation catalyzed by the Gene-A* moiety reached 80-90% in the three proteins, and kinetic study revealed that the reaction achieved a steady state after 10 min. Moreover, dot blot analyses were performed to evaluate the hybridization and aptamer-forming ability of ssDNA conjugated to the Gene-A* moiety of a recombinant Gene-A*-FLuc protein. This study demonstrated that a strategy using recombinant proteins fused to Gene-A* could offer a versatile, rapid, easy-to-use, and economical platform for producing DNA-protein conjugates.

    DOI: 10.1021/bc300118m

    PubMed

    researchmap

  • Detection of antigens using a protein-DNA chimera developed by enzymatic covalent bonding with phiX gene A*. 国際誌

    Farhima Akter, Masayasu Mie, Sebastian Grimm, Per-Åke Nygren, Eiry Kobatake

    Analytical chemistry   84 ( 11 )   5040 - 6   2012年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The chemical reactions used to make antibody-DNA conjugates in many immunoassays diminish antigen-binding activity and yield heterogeneous products. Here, we address these issues by developing an antibody-based rolling circle amplification (RCA) strategy using a fusion of φX174 gene A* protein and Z(mab25) (A*-Zmab). The φX174 gene A* protein is an enzyme that can covalently link with DNA, while the Z(mab25) protein moiety can bind to specific species of antibodies. The DNA in an A*-Zmab conjugate was attached to the A* protein at a site chosen to not interfere with protein function, as determined by enzyme-linked immunosorbent assay (ELISA) and gel mobility shift analysis. The novel A*-Zmab-DNA conjugate retained its binding capabilities to a specific class of murine immunoglobulin γ1 (IgG1) but not to rabbit IgG. This indicates the generality of the A*-Zmab-based immuno-RCA assay that can be used in-sandwich ELISA format. Moreover, the enzymatic covalent method dramatically increased the yields of A*-Zmab-DNA conjugates up to 80% after a 15 min reaction. Finally, sensitive detection of human interferon-γ (IFN-γ) was achieved by immuno-RCA using our fusion protein in sandwich ELISA format. This new approach of the use of site-specific enzymatic DNA conjugation to proteins should be applicable to fabrication of novel immunoassays for biosensing.

    DOI: 10.1021/ac300708r

    PubMed

    researchmap

  • Construction of affinity changeable antibody in response to Ca2+. 国際誌

    Eiry Kobatake, Chihiro Kosaku, Satoshi Hanzawa, Masayasu Mie

    Biotechnology letters   34 ( 6 )   1019 - 23   2012年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Immunoaffinity chromatography is a powerful method for purification of proteins because of the high selectivity and avidity of antibodies. Due to the strength of antigen-antibody binding, however, elution of proteins bound to antibodies that are covalently immobilized on the column is performed by temporary denaturation of the antibody. Therefore, the development of milder elution conditions could improve the recovery of the antibodies and prolong the life of the immunoaffinity column. We describe the design and construction of an antibody that changes its affinity in response to external stimuli. The heavy chain and light chain of a single chain Fv of the D1.3 antibody against hen egg-white lysozyme (HEL) were fused at the N- and C-termini, respectively, of the calmodulin-M13 fusion protein. The affinity of this fusion protein for HEL could be modulated by changing the Ca(2+) concentration.

    DOI: 10.1007/s10529-012-0881-z

    PubMed

    researchmap

  • Development of a homogeneous immunoassay system using protein A fusion fragmented Renilla luciferase. 国際誌

    Masayasu Mie, Ngo Phan Bich Thuy, Eiry Kobatake

    The Analyst   137 ( 5 )   1085 - 9   2012年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A homogeneous immunoassay system was developed using fragmented Renilla luciferase (Rluc). The B domain of protein A was fused to two Rluc fragments. When complexes between an antibody and fragmented Rluc fusion proteins bind to target molecules, the Rluc fragments come into close proximity and the luminescence activity of fragmented Rluc is restored by complementation. As proof-of-principle, this fragmented Rluc system was used to detect E. coli homogeneously using an anti-E. coli antibody.

    DOI: 10.1039/c2an15976g

    PubMed

    researchmap

  • Homeostasis of extracellular ATP in human erythrocytes. 国際誌

    Nicolas Montalbetti, Maria F Leal Denis, Omar P Pignataro, Eiry Kobatake, Eduardo R Lazarowski, Pablo J Schwarzbaum

    The Journal of biological chemistry   286 ( 44 )   38397 - 38407   2011年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We explored the intra- and extracellular processes governing the kinetics of extracellular ATP (ATPe) in human erythrocytes stimulated with agents that increase cAMP. Using the luciferin-luciferase reaction in off-line luminometry we found both direct adenylyl cyclase activation by forskolin and indirect activation through β-adrenergic stimulation with isoproterenol-enhanced [ATP]e in a concentration-dependent manner. A mixture (3V) containing a combination of these agents and the phosphodiesterase inhibitor papaverine activated ATP release, leading to a 3-fold increase in [ATP]e, and caused increases in cAMP concentration (3-fold for forskolin + papaverine, and 10-fold for 3V). The pannexin 1 inhibitor carbenoxolone and a pannexin 1 blocking peptide ((10)Panx1) decreased [ATP]e by 75-84%. The residual efflux of ATP resulted from unavoidable mechanical perturbations stimulating a novel, carbenoxolone-insensitive pathway. In real-time luminometry experiments using soluble luciferase, addition of 3V led to an acute increase in [ATP]e to a constant value of ∼1 pmol × (10(6) cells)(-1). A similar treatment using a surface attached luciferase (proA-luc) triggered a rapid accumulation of surface ATP levels to a peak concentration of 2.4 pmol × (10(6) cells)(-1), followed by a slower exponential decay (t(½) = 3.7 min) to a constant value of 1.3 pmol × (10(6) cells)(-1). Both for soluble luciferase and proA-luc, ATP efflux was fully blocked by carbenoxolone, pointing to a 3V-induced mechanism of ATP release mediated by pannexin 1. Ecto-ATPase activity was extremely low (∼28 fmol × (10(6) cells min)(-1)), but nevertheless physiologically relevant considering the high density of erythrocytes in human blood.

    DOI: 10.1074/jbc.M111.221713

    PubMed

    researchmap

  • Cell fingerprint patterns using designed α-helical peptides to screen for cell-specific toxicity. 国際誌

    Kenji Usui, Takashi Kakiyama, Kin-Ya Tomizaki, Masayasu Mie, Eiry Kobatake, Hisakazu Mihara

    Bioorganic & medicinal chemistry letters   21 ( 21 )   6281 - 4   2011年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We conducted cell-based cytotoxicity screening of a 101-membered α-helical peptide library using cell fingerprints (CFPs). The CFP data suggested that there is a relationship between cytotoxicity and peptide characteristics, such as hydrophobicity, charge, and amino acid composition. In spite of the small size of the library used in this study, several peptides demonstrated cell-specific toxicity. The strategy of combining a designed peptide library with CFP thus shows real promise for peptide-based screening with cells.

    DOI: 10.1016/j.bmcl.2011.09.002

    PubMed

    researchmap

  • Construction of a bFGF-tethered extracellular matrix using a coiled-coil helical interaction. 国際誌

    Eiry Kobatake, Ryota Takahashi, Masayasu Mie

    Bioconjugate chemistry   22 ( 10 )   2038 - 42   2011年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel method for construction of biomaterials for tissue engineering was developed. Noncovalent associations between extracellular matrix (ECM) and growth factors were achieved by engineering recombinant versions of both proteins that included helical peptides that could form a coiled-coil structure. The helix A peptide, which is capable of forming a coiled-coil helical structure, was fused with a matrix protein that contains a cell-adhesive RGD sequence. The helix B peptide, which is also capable of forming a coiled-coil helical structure, was fused with basic fibroblast growth factor (bFGF). Each protein retained its original activity of promoting cell adhesion and cell proliferation, respectively. These recombinant proteins associated noncovalently through coiled-coil helix formation between helix A and helix B. The resulting complex combined the functions of both proteins, and this method of joining proteins with different functionalities could be used to develop biomaterials for tissue engineering.

    DOI: 10.1021/bc200249u

    PubMed

    researchmap

  • Visualization of flow-induced ATP release and triggering of Ca2+ waves at caveolae in vascular endothelial cells. 国際誌

    Kimiko Yamamoto, Kishio Furuya, Makiko Nakamura, Eiry Kobatake, Masahiro Sokabe, Joji Ando

    Journal of cell science   124 ( Pt 20 )   3477 - 83   2011年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Endothelial cells (ECs) release ATP in response to shear stress, a fluid mechanical force generated by flowing blood but, although its release has a crucial role in controlling a variety of vascular functions by activating purinergic receptors, the mechanism of ATP release has never been established. To analyze the dynamics of ATP release, we developed a novel chemiluminescence imaging method by using cell-surface-attached firefly luciferase and a CCD camera. Upon stimulation of shear stress, cultured human pulmonary artery ECs simultaneously released ATP in two different manners, a highly concentrated, localized manner and a less concentrated, diffuse manner. The localized ATP release occurred at caveolin-1-rich regions of the cell membrane, and was blocked by caveolin-1 knockdown with siRNA and the depletion of plasma membrane cholesterol with methyl-β-cyclodexrin, indicating involvement of caveolae in localized ATP release. Ca(2+) imaging with Fluo-4 combined with ATP imaging revealed that shear stress evoked an increase in intracellular Ca(2+) concentration and the subsequent Ca(2+) wave that originated from the same sites as the localized ATP release. These findings suggest that localized ATP release at caveolae triggers shear-stress-dependent Ca(2+) signaling in ECs.

    DOI: 10.1242/jcs.087221

    PubMed

    researchmap

  • Immuno-rolling circle amplification using a multibinding fusion protein. 国際誌

    Farhima Akter, Masayasu Mie, Eiry Kobatake

    Analytical biochemistry   416 ( 2 )   174 - 9   2011年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Ultrasensitive detection of specific, low level proteins in body fluids is particularly challenging. Owing to the extreme sensitivity of the polymerase chain reaction step, the requirements for immuno-rolling circle amplification (immuno-RCA) are much more stringent than for conventional ELISA. Here, we report the development of a rolling circle amplification procedure using multibinding fusion protein to enhance signals of immuno-RCA to detect a cancer biomarker, α-fetoprotein (AFP). We successfully avoid the covalent linkage between antibody and DNA or antibody and biotin/streptavidin by introducing a new genetically engineered fusion protein which contains the C2 domain of protein G and biotin acceptor peptide (BAP) which is intended to maintain the biological activity of the antibody. The purified fusion protein retained its binding affinity with IgG and streptavidin after efficient expression in Escherichia coli. Immuno-RCA in combination with BAP-C2 specifically and sensitively detected AFP in a microplate format. Therefore, the sensitivity and convenient nature of this method should contribute to effective signal enhancement in immunoassays for cancer biomarker detection.

    DOI: 10.1016/j.ab.2011.05.004

    PubMed

    researchmap

  • Detection of small RNA molecules by a combination of branched rolling circle amplification and bioluminescent pyrophosphate assay. 国際誌

    Yasumasa Mashimo, Masayasu Mie, Shigeya Suzuki, Eiry Kobatake

    Analytical and bioanalytical chemistry   401 ( 1 )   221 - 7   2011年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Aberrant expression of miRNAs often correlates with various human diseases. Therefore, miRNAs have been focused as disease biomarkers. Here, a novel application of a bioluminescence (BL) assay for small RNA quantification is described. The assay is based on detecting pyrophosphate (PPi) molecules released during branched rolling circle amplification (BRCA) with a second primer in the presence of target RNA molecules. The number of released PPi molecules is correlated with the target RNA copy number. This assay was capable of detecting at least 20 amol of target RNA molecules, and the dynamic range extended over at least three orders of magnitude. Appropriate use of a second primer allowed for sensitive detection of RNA molecules with a high S/N ratio in less time. Moreover, the assay could specifically detect as low as 0.1 fmol of a target small RNA within a total RNA extract with high reproducibility. These data suggest that our assay has the potential to become a simple, rapid, and highly sensitive method to detect miRNA. Furthermore, this method combined with a BL assay, which utilizes a widely used inexpensive luminometer, could be used for a wider, versatile range of applications.

    DOI: 10.1007/s00216-011-5083-3

    PubMed

    researchmap

  • Direct detection of RNAs in living cells using peptide-inserted Renilla luciferase. 国際誌

    Takashi Andou, Tamaki Endoh, Masayasu Mie, Eiry Kobatake

    The Analyst   136 ( 12 )   2446 - 9   2011年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    In this study, non-engineered RNAs were detected in living cells using bioluminescence. Two types of probe were utilized: a peptide inserted RLuc (PI-RLuc) probe and a split-RNA probe. Incorporation of the PI-RLuc and split-RNA probes enabled the direct detection of RNA introduced into living cells.

    DOI: 10.1039/c1an15130d

    PubMed

    researchmap

  • Selection of DNA aptamers recognizing small cell lung cancer using living cell-SELEX. 国際誌

    Takao Kunii, Shun-ichiro Ogura, Masayasu Mie, Eiry Kobatake

    The Analyst   136 ( 7 )   1310 - 2   2011年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We applied Systematic Evolution of Ligands by EXponential enrichment using Small Cell Lung Cancer (SCLC) cells. A DNA aptamer was identified and evaluated by fluorescent confocal microscopy and flow cytometry. Our results showed that the DNA aptamer binds to molecules that exist predominantly on target SCLC cell surfaces compared with other types of SCLC cells.

    DOI: 10.1039/c0an00962h

    PubMed

    researchmap

  • Construction of a functional IgG-binding luciferase fusion protein for the rapid detection of specific bacterial strains. 国際誌

    Makiko Nakamura, Masayasu Mie, Eiry Kobatake

    The Analyst   136 ( 1 )   71 - 2   2011年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A fusion protein consisting of two IgG-binding domains of streptococcal protein G and firefly luciferase was constructed, and a simple and specific bioluminescent immunodetection system for bacterial strains was developed.

    DOI: 10.1039/c0an00460j

    PubMed

    researchmap

  • Targeted delivery using immunoliposomes with a lipid-modified antibody-binding protein. 国際誌

    Eiry Kobatake, Ryo Yamano, Masayasu Mie

    Applied biochemistry and biotechnology   163 ( 2 )   296 - 303   2011年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A recombinant antibody-binding protein originating from streptococcal protein G was modified with lipid in a site-directed manner by genetic engineering. The resulting lipoprotein was incorporated into the surface of liposomes by simple mixing. Immunoliposomes were then prepared by binding anti-IgG antibodies molecules onto the surface of proteoliposome via the lipid-anchored streptococcal protein G. Either small fluorophores or fluorescently labeled proteins were encapsulated into prepared immunoliposomes, and these molecular tracers could be delivered into cells whose surfaces were marked with specific antibodies.

    DOI: 10.1007/s12010-010-9038-5

    PubMed

    researchmap

  • Construction of a thermostable cell adhesion protein for reverse transfection. 国際誌

    JooYoun Bae, Sayaka Goto, Masayasu Mie, Eiry Kobatake

    Journal of biotechnology   150 ( 3 )   447 - 51   2010年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Transfection arrays are useful to analyze multiple genes at one time. In order to carry out gene transfection, cells are cultured on a plate on which genes are spotted to make extracellular matrix. However, this method is limited by low cell adhesion and transfection efficiency. To overcome these problems, we attempted to construct a novel extracellular matrix protein consisting of a variety of functional peptides. Here we fused the elastin derived peptide Ala-Pro-Gly-Val-Gly-Val (APGVGV) with the cell adhesive peptides, Pro-His-Ser-Arg-Asn (PHSRN) and Arg-Gly-Asp (RGD). The resulting fusion proteins, E12PSGR, had high cell adhesive activity, transfection efficiency, and thermal stability.

    DOI: 10.1016/j.jbiotec.2010.09.960

    PubMed

    researchmap

  • Evaluation of small ligand-protein interactions by using T7 RNA polymerase with DNA-modified ligand. 国際誌

    Masayasu Mie, Rie Sugita, Tamaki Endoh, Eiry Kobatake

    Analytical biochemistry   405 ( 1 )   109 - 13   2010年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The interaction between proteins and ligands was evaluated by T7 RNA polymerase transcription with a DNA-modified ligand. The principle of this method is suppression of T7 RNA polymerase transcription by binding of a protein to small ligand modified by conjugation with a T7 RNA polymerase promoter. To demonstrate proof of principle, biotin or antifolate methotrexate was modified by covalent attachment of a T7 RNA promoter. Using these T7 RNA promoter-modified ligands, T7 RNA polymerase transcriptions were performed in the presence or absence of an anti-biotin antibody or recombinant human dihydrofolate reductase, respectively. Transcription was suppressed in the presence of each binding protein plus its modified ligand, but not in the absence of the binding protein.

    DOI: 10.1016/j.ab.2010.06.011

    PubMed

    researchmap

  • Designed short peptides that form amyloid-like fibrils in coassembly with amyloid beta-peptide (Abeta) decrease the toxicity of Abeta to neuronal PC12 cells. 国際誌

    Miho Suzuki, Tsuyoshi Takahashi, Junichi Sato, Masayasu Mie, Eiry Kobatake, Hisakazu Mihara

    Chembiochem : a European journal of chemical biology   11 ( 11 )   1525 - 30   2010年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1002/cbic.201000181

    PubMed

    researchmap

  • Evaluation of small ligand-protein interaction by ligation reaction with DNA-modified ligand. 査読 国際誌

    Sugita Rie, Mie Masayasu, Funabashi Hisakage, Kobatake Eiry

    Biotechnology Letters   32 ( 1 )   97 - 102   2010年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :A method for the evaluation of interactions between protein and ligand using DNA-modified ligands, including signal enhancement of the DNA ligation reactions, is described. For proof of principle, a DNA probe modified by biotin was used. Two DNA probes were prepared with complementary sticky-ends. While one DNA probe was modified at the 5'-end of the sticky-end, the other was not modified. The probes could be ligated together by T4 DNA ligase along the strand without biotin modification. However, in the presence of streptavidin or anti-biotin Fab, the ligation reaction joining the two probes could not occur on either strand.

    DOI: 10.1007/s10529-009-0109-z

    PubMed

    researchmap

  • Detection of bioactive small molecules by fluorescent resonance energy transfer (FRET) in RNA-protein conjugates. 国際誌

    Tamaki Endoh, Ryo Shintani, Masayasu Mie, Eiry Kobatake, Takashi Ohtsuki, Masahiko Sisido

    Bioconjugate chemistry   20 ( 12 )   2242 - 6   2009年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Bioactive small molecules such as metabolites and drugs play important roles in regulating biological functions. A technique for visualizing such small molecules is very useful to understand their molecular mechanisms. In this study, an RNA-protein conjugate, which consists of an RRE-RNA sensor protein (EYFP-Rev-ECFP) and an altered RRE-RNA, was constructed to detect bioactive small molecules by fluorescent resonance energy transfer (FRET). We designed a theophylline-aptamer-inserted RRE-RNA (Theo-RRE) to detect theophylline as a model target molecule. Theo-RRE formed an RNA-protein conjugate with EYFP-Rev-ECFP in the presence of theophylline. As a result, theophylline was specifically detected down to 10 microM by the FRET increase in distinction from theophylline analogue, caffeine, in cell lysates.

    DOI: 10.1021/bc9002184

    PubMed

    researchmap

  • Construction of a multi-functional extracellular matrix protein that increases number of N1E-115 neuroblast cells having neurites. 国際誌

    Makiko Nakamura, Masayasu Mie, Hisakazu Mihara, Makoto Nakamura, Eiry Kobatake

    Journal of biomedical materials research. Part B, Applied biomaterials   91 ( 1 )   425 - 32   2009年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    An artificially designed fusion protein, which was designed to have strong cell adhesive activity and an active functional unit that enhances neuronal differentiation of mouse N1E-115 neuroblast cells, was developed. In this study, a laminin-1-derived IKVAV sequence, which stimulates neurite outgrowth in conditions of serum deprivation, was engineered and incorporated into an elastin-derived structural unit. The designed fusion protein also had a cell-adhesive RGD sequence derived from fibronectin. The resultant fusion protein could adsorb efficiently onto hydrophobic culture surfaces and showed cell adhesion activity similar to laminin. N1E-115 cells grown on the fusion protein exhibited more cells with neurites than cells grown on laminin-1. These results indicated that the constructed protein could retain properties of incorporated functional peptides and could provide effective signal transport. The strategy of designing multi-functional fusion proteins has the possibility for supporting current tissue engineering techniques.

    DOI: 10.1002/jbm.b.31418

    PubMed

    researchmap

  • Promotion of angiogenesis by an artificial extracellular matrix protein containing the laminin-1-derived IKVAV sequence. 国際誌

    Makiko Nakamura, Kumiko Yamaguchi, Masayasu Mie, Makoto Nakamura, Keiichi Akita, Eiry Kobatake

    Bioconjugate chemistry   20 ( 9 )   1759 - 64   2009年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The laminin-1-derived IKVAV sequence is known for its angiogenic function. We previously developed artificial extracellular matrix (ECM) proteins containing the IKVAV sequence. They were designed to have collagen-binding activity and active functional units that promote network formation of vascular endothelial cells. The resultant fusion protein, called EREI2CBD, was confirmed to bind to collagen type I and promote tubular network formation of endothelial cells cultured in collagen gel in vitro. In this study, EREI2CBD was applied to the chick chorioallantoic membrane (CAM) assay to investigate in vivo angiogenic activity. The CAM assay results showed that EREI2CBD caused the number and area of vascular branches to be increased. The constructed fusion protein and the engineering strategy of designing multifunctional ECM proteins support current tissue engineering techniques.

    DOI: 10.1021/bc900126b

    PubMed

    researchmap

  • Recombination system based on cre alpha complementation and leucine zipper fusions. 国際誌

    Azadeh Seidi, Masayasu Mie, Eiry Kobatake

    Applied biochemistry and biotechnology   158 ( 2 )   334 - 42   2009年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    In a previous study, a recombination system based on the alpha complementation of cre recombinase and protein transduction was established. This system relied on the transient expression of the inactive, self-excisable C-terminal (beta) and the transduction of the N-terminal (alpha) cre fragments to cells as a purified protein. This recombination system potentially results in a less invasive and more controllable cre recombination in mammalian cells. In this study, we have employed a more efficient complementation triggering sequence using more than only the overlapping amino acids to help the alpha and beta fragments reassociate. In order to increase the association efficiency of the complementing fragments of cre recombinase, we chose to use a fusion of cre fragments to a self-heterodimerizing pair of proteins to trigger their binding and thus increase the efficiency of the restored enzymatic activity. For this purpose, the leucine zipper motifs (bJun and bFos) of the AP-1 transcription were fused to cre fragments (alpha and beta, respectively). This resulted in an increased reassociation efficiency of the fragments and a two times more efficient recombination system compared with the previous study.

    DOI: 10.1007/s12010-008-8409-7

    PubMed

    researchmap

  • Construction of nanoscale protein particle using temperature-sensitive elastin-like peptide and polyaspartic acid chain. 国際誌

    Yoshihiko Fujita, Masayasu Mie, Eiry Kobatake

    Biomaterials   30 ( 20 )   3450 - 7   2009年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Temperature-responsive monodisperse spheres are useful for various in vivo and in vitro applications. Size, response temperature and biocompatibility are particularly important consideration with in vivo applications. In this work, we constructed fusion proteins of low antigenic elastin-like peptide (ELP) and a polyaspartic acid chain, and studied the particles that had a favorable size and temperature of formation of particle. From DLS analysis, we confirmed that some of them formed particles with less than 100nm in diameter around 37 degrees C, while the diameter of ELPs alone is larger than 1microm in diameter. The (PGVGV)(160)D(22), which is composed of a short aspartic acid chain and a long ELP region, had a tendency to form large particles. The temperature of formation and collapse of the protein particle were dependent on the length of the ELP and the polyaspartic acid chain, and the concentration of proteins. The direct observation with TEM indicated that the morphologies of the particles were spherical except when (PGVGV)(160)D(22) was used. The intensities of the environment-sensitive hydrophobic fluorescence increased at 37 degrees C more than 1.5 times as much as at 25 degrees C both in free form and modified at the ELP region. These results indicated that the polarity of the environment surround the fluorescence decreased or the movement of fluorescence was limited, and thus, implied that the ELP formed a more hydrophobic or rigid region and could hold hydrophobic drugs. These results suggest that a temperature-responsive protein particle with favorable size and temperature of formation can be constructed that is suitable for any in vitro or in vivo application.

    DOI: 10.1016/j.biomaterials.2009.03.012

    PubMed

    researchmap

  • Biofabrication of antibodies and antigens via IgG-binding domain engineered with activatable pentatyrosine pro-tag. 国際誌

    Hsuan-Chen Wu, Xiao-Wen Shi, Chen-Yu Tsao, Angela T Lewandowski, Rohan Fernandes, Chi-Wei Hung, Philip DeShong, Eiry Kobatake, James J Valdes, Gregory F Payne, William E Bentley

    Biotechnology and bioengineering   103 ( 2 )   231 - 40   2009年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We report the assembly of seven different antibodies (and two antigens) into functional supramolecular structures that are specifically designed to facilitate integration into devices using entirely biologically based bottom-up fabrication. This is enabled by the creation of an engineered IgG-binding domain (HG3T) with an N-terminal hexahistidine tag that facilitates purification and a C-terminal enzyme-activatable pentatyrosine "pro-tag" that facilitates covalent coupling to the pH stimuli-responsive polysaccharide, chitosan. Because we confer pH-stimuli responsiveness to the IgG-binding domain, it can be electrodeposited or otherwise assembled into many configurations. Importantly, we demonstrate the loading of both HG3T and antibodies can be achieved in a linear fashion so that quantitative assessment of antibodies and antigens is feasible. Our demonstration formats include: conventional multiwell plates, micropatterned electrodes, and fiber networks. We believe biologically based fabrication (i.e., biofabrication) provides bottom-up hierarchical assembly of a variety of nanoscale components for applications that range from point-of-care diagnostics to smart fabrics.

    DOI: 10.1002/bit.22238

    PubMed

    researchmap

  • Transduction of MyoD protein into myoblasts induces myogenic differentiation without addition of protein transduction domain. 国際誌

    Tomohide Noda, Takeshi Fujino, Masayasu Mie, Eiry Kobatake

    Biochemical and biophysical research communications   382 ( 2 )   473 - 7   2009年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Protein transduction is a new technology with the potential for controlling cellular functions. Addition of tissue-specific transcription factors into cells could induce a specific differentiation pathway. In this paper, MyoD protein, a muscle-specific transcription factor, was introduced into the mouse myoblast cell line C2C12 to induce myogenic differentiation. Addition of fluorescently labeled MyoD protein revealed that MyoD can permeate the cell membrane without the addition of a protein transduction domain (PTD). Addition of MyoD protein induced formation of multi-nucleated myotubes. These results showed that MyoD protein has a PTD in its primary sequence and that myogenic differentiation can be induced by addition of MyoD protein.

    DOI: 10.1016/j.bbrc.2009.03.060

    PubMed

    researchmap

  • Construction of multifunctional proteins for tissue engineering: Epidermal growth factor with collagen binding and cell adhesive activities 国際誌

    Elloumi Hannachi Imen, Makiko Nakamura, Masayasu Mie, Eiry Kobatake

    JOURNAL OF BIOTECHNOLOGY   139 ( 1 )   19 - 25   2009年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.jbiotec.2008.09.011

    Web of Science

    PubMed

    researchmap

  • RNA detection using peptide-inserted Renilla luciferase. 国際誌

    Takashi Andou, Tamaki Endoh, Masayasu Mie, Eiry Kobatake

    Analytical and bioanalytical chemistry   393 ( 2 )   661 - 8   2009年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel complementation system with short peptide-inserted-Renilla luciferase (PI-Rluc) and split-RNA probes was constructed for noninvasive RNA detection. The RNA binding peptides HIV-1 Rev and BIV Tat were used as inserted peptides. They display induced fit conformational changes upon binding to specific RNAs and trigger complementation or discomplementation of Rluc. Split-RNA probes were designed to reform the peptide binding site upon hybridization with arbitrarily selected target RNA. This set of recombinant protein and split-RNA probes enabled a high degree of sensitivity in RNA detection. In this study, we show that the Rluc system is comparable to Fluc, but that its detection limit for arbitrarily selected RNA (at least 100 pM) exceeds that of Fluc by approximately two orders of magnitude.

    DOI: 10.1007/s00216-008-2473-2

    PubMed

    researchmap

  • Selection of mRNA 5'-untranslated region sequence with high translation efficiency through ribosome display. 国際誌

    Masayasu Mie, Shun Shimizu, Fumio Takahashi, Eiry Kobatake

    Biochemical and biophysical research communications   373 ( 1 )   48 - 52   2008年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The 5'-untranslated region (5'-UTR) of mRNAs functions as a translation enhancer, promoting translation efficiency. Many in vitro translation systems exhibit a reduced efficiency in protein translation due to decreased translation initiation. The use of a 5'-UTR sequence with high translation efficiency greatly enhances protein production in these systems. In this study, we have developed an in vitro selection system that favors 5'-UTRs with high translation efficiency using a ribosome display technique. A 5'-UTR random library, comprised of 5'-UTRs tagged with a His-tag and Renilla luciferase (R-luc) fusion, were in vitro translated in rabbit reticulocytes. By limiting the translation period, only mRNAs with high translation efficiency were translated. During translation, mRNA, ribosome and translated R-luc with His-tag formed ternary complexes. They were collected with translated His-tag using Ni-particles. Extracted mRNA from ternary complex was amplified using RT-PCR and sequenced. Finally, 5'-UTR with high translation efficiency was obtained from random 5'-UTR library.

    DOI: 10.1016/j.bbrc.2008.05.173

    PubMed

    researchmap

  • Construction of multi-functional extracellular matrix proteins that promote tube formation of endothelial cells 国際誌

    Makiko Nakamura, Masayasu Mie, Hisakazu Mihara, Makoto Nakamura, Eiry Kobatake

    BIOMATERIALS   29 ( 20 )   2977 - 2986   2008年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.biomaterials.2008.04.006

    Web of Science

    PubMed

    researchmap

  • Novel extracellular matrix for cell sheet recovery using genetically engineered elastin-like protein. 国際誌

    Masayasu Mie, Yasunori Mizushima, Eiry Kobatake

    Journal of biomedical materials research. Part B, Applied biomaterials   86 ( 1 )   283 - 90   2008年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Elastin-like peptides (ELPs) sequences are repeats of the pentapeptide GVGVP, and they have the ability to coaggregate reversibly, depending on the temperature. By exploiting this characteristic, a novel extracellular matrix protein (ECM) containing ELP was developed genetically to harvest a cell sheet from a culture dish. One of the ELP constructs, G288, consisted of 288 repeats of the sequence GVGVGP (G); it was attached to a hydrophobic dish surface. Next, cells with the sequence His-G36RG36, which has a His tag and an RGD sequence (R) that promotes attachment of the cell between the G36 sequences, consisted of 36 repeats of the sequence GVGVP, were added to the dish. After these cells became confluent, the temperature was changed to 20 degrees C in order to reverse the coaggregation. At this temperature, cells could be detached from the dish as a cell sheet. This genetically engineering method for construction of thermoresponsive ECM would be suitable to modify ECM with further functional domains.

    PubMed

    researchmap

  • Chitosan fibers: versatile platform for nickel-mediated protein assembly. 国際誌

    Xiao-Wen Shi, Hsuan-Chen Wu, Yi Liu, Chen-Yu Tsao, Kai Wang, Eiry Kobatake, William E Bentley, Gregory F Payne

    Biomacromolecules   9 ( 5 )   1417 - 23   2008年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Fibers are a versatile platform because standard methods are available for the hierarchical assembly of individual fibers into controllable patterns (e.g., fabrics). Here, we report a method to biofunctionalize individual fibers by the reversible binding of proteins, and we suggest the potential of fiber assemblies by generating simple multifiber structures. Specifically, we use chitosan fibers and show that nickel can mediate assembly of histidine-tagged proteins to these fibers. Initial studies with the model His-GFP demonstrate the concept of nickel-mediated protein assembly. Subsequent studies with a His-tagged streptococcal antibody-binding protein (protein G) demonstrate the assembly of antibodies to generate antibody-presenting fibers. Antibody assembly onto the fiber was shown to be controllable, and antigen-binding to these antibody-presenting fibers was measured. Importantly, antibody and antigen were observed to penetrate substantially into the individual fibers (tens of microns) to allow the assembly of pmole levels of protein per cm of fiber length. Finally, antibody-presenting fibers with different specificities were assembled into simple one- and two-dimensional structures, and individual fibers in these fiber assemblies were observed to capture their respective antigens from antigen mixtures. The potential of fiber assemblies for multiplexed analysis is discussed.

    DOI: 10.1021/bm800072e

    PubMed

    researchmap

  • Direct detection of RNA transcription by FRET imaging using fluorescent protein probe. 国際誌

    Tamaki Endoh, Masayasu Mie, Eiry Kobatake

    Journal of biotechnology   133 ( 4 )   413 - 7   2008年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We have constructed a reporter system for intracellular direct detection of RNA transcription that consists of two biomolecular components. The first part is a GFP-based recombinant protein probe (YRG0C-11ad) containing the RNA-binding Rev-peptide between ECFP and EYFP. The second component is RRE-RNA, which specifically binds to the Rev-peptide. Cells stably expressing YRG0C-11ad were identified by an increased FRET signal after direct transfection or intracellular transcription of RRE-RNA. In addition, the signal increase is more noticeable if tandemly repeated RRE-RNA is used as the reporter. Untranslatable non-coding RNAs are regarded as regulators of cellular gene expression, but they are difficult to study using indirect reporter systems that are dependent on translational products. Direct detection of reporter RNA would be a useful method for the detection of intracellular promoter activity during transcription of untranslatable RNAs.

    PubMed

    researchmap

  • Novel recombination system using Cre recombinase alpha complementation. 国際誌

    Azadeh Seidi, Masayasu Mie, Eiry Kobatake

    Biotechnology letters   29 ( 9 )   1315 - 22   2007年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A major limitation for the use of Cre recombinase is its toxicity and a lack of temporal control over its activity. We have developed a new recombination system using Cre recombinase alpha-complementation. Cre recombinase was divided and one fragment (beta) was introduced into cells between two loxP sites with a CMV promoter in the upstream. The gene of interest (EGFP) was positioned just downstream of this construct. Cre recombinase activity was recovered by adding the other part of the molecule (alpha) to cells as a protein fragment, as evidenced by the expression of EGFP under the control of the CMV promoter. The activity of fragmented cre reached 68% of that of the wild type enzyme at 1 microM alpha-protein.

    PubMed

    researchmap

  • Construction of intramolecular luciferase complementation probe for detecting specific RNA 査読 国際誌

    Tamaki Endoh, Masayasu Mie, Hisakage Funabashi, Tatsuya Sawasaki, Yaeta Endo, Eiry Kobatake

    BIOCONJUGATE CHEMISTRY   18 ( 3 )   956 - 962   2007年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1021/bc060351o

    Web of Science

    PubMed

    researchmap

  • Design of a thermocontrollable protein complex. 査読 国際誌

    Fujita Yoshihiko, Funabashi Hisakage, Mie Masayasu, Kobatake Eiry

    Bioconjugate Chemistry   18 ( 5 )   1619 - 1624   2007年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :It is widely recognized that stimuli-responsive nanostructures play a promising role in nanodevices for medical treatments and experimental tools. We have designed and constructed a basic structure which controls the distance between two termini domains through temperature reversibility. Our structure, shaped like a bouquet, is composed of two proteins, alpha-helix and elastin-like protein (ELP). Alpha-helices align and bundle the ELP while ELP twists and forms a fiber-like structure at warm temperatures. This ELP conformational change alters the distance between the structure termini at the site opposite the alpha-helix. We connected enhanced yellow fluorescent protein (EYFP) and enhanced cyan fluorescent protein (ECFP) at the structure's two termini to evaluate the distance using fluorescence resonance energy transfer (FRET) efficiency. These proteins spontaneously formed a complex which decreased the distance between the two fluorescent proteins located at its termini, at physiologically relevant temperatures. This change was repeated with complete reversibility (n = 5).

    DOI: 10.1021/bc070120x

    PubMed

    researchmap

  • Assessment of small ligand-protein interactions by electrophoretic mobility shift assay using DNA-modified ligand as a sensing probe. 査読 国際誌

    Funabashi Hisakage, Ubukata Michito, Ebihara Takashi, Aizawa Masuo, Mie Masayasu, Kobatake Eiry

    Biotechnology Letters   29 ( 5 )   785 - 789   2007年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :The interaction between a small ligand and a protein were assessed by electrophoretic mobility shift assay. A sensing probe was created by modifying the model ligand, biotin, with DNA. The complex of DNA-modified ligand and anti-biotin antibody or streptavidin as a target protein was analyzed by agarose gel electrophoresis. The band corresponding to the DNA-modified ligand was shifted in the presence of the target protein, and the intensities of the shifted bands were decreased by adding increasing concentrations of free ligand ranging from 0.1 microM to 100 microM. From this calibration the concentration of ligand in the samples could be determined, allowing for evaluation of the interaction between a small ligand and its target.

    DOI: 10.1007/s10529-006-9301-6

    PubMed

    researchmap

  • IgG binding kinetics to oligo B protein A domains on lipid layers immobilized on a 27 MHz quartz-crystal microbalance. 国際誌

    Hideyuki Mitomo, Hideki Shigematsu, Eiry Kobatake, Hiroyuki Furusawa, Yoshio Okahata

    Journal of molecular recognition : JMR   20 ( 2 )   83 - 9   2007年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Although molecular recognitions between membrane receptors and their soluble ligands have been analyzed using their soluble proteins in bulk solutions, molecular recognitions of membrane receptors should be studied on lipid membranes considering their orientation and dynamics on membrane surfaces. We employed Staphylococcal Protein A (SpA) oligo B domains with long trialkyl-tags from E. coli (LppBx, x = 1, 2, and 5) and immobilized LppBx on lipid layers using hydrophobic interactions from the trialkyl-tag, while maintaining the orientation of B domain-chains on a 27 MHz quartz-crystal microbalance (QCM; AT-cut shear mode). The binding of IgG Fc regions to LppBx on lipid layers was detected by frequency decreases (mass increases) on the QCM. The maximum amount bound (Delta m(max)), association constants (K(a)), association and dissociation rate constants (k(1) and k(-1), respectively) were obtained. Binding kinetics of IgG to LppB2 and LppB5 were quite similar, showing a simple 1:1 binding of the IgG Fc region to the B domain, when the surface coverage of LppB2 and LppB5 on the lipid surface is low (1.4%). When LppB5 was immobilized at the high surface coverage of 3.5%, the complex bindings of IgG such as one IgG bound to one or two LppB5 on the membrane could be observed. IgG-LppB1 binding was largely restricted because of steric hindrance on lipid surfaces. This gives a suggestion why Protein A has five IgG binding domains.

    PubMed

    researchmap

  • In vitro selection of zinc finger DNA-binding proteins through ribosome display 国際誌

    IHARA Hiroshi, MIE Masayasu, FUNABASHI Hisakage, TAKAHASHI Fumio, SAWASAKI Tatsuya, ENDO Yaeta, KOBATAKE Eiry

    Biochem. and Biophys. Research Commun.   345 ( 3 )   1149 - 1154   2006年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.bbrc.2006.05.029

    Scopus

    PubMed

    researchmap

  • Cell-surface-localized ATP detection with immobilized firefly luciferase. 国際誌

    Makiko Nakamura, Masayasu Mie, Hisakage Funabashi, Kimiko Yamamoto, Joji Ando, Eiry Kobatake

    Analytical biochemistry   352 ( 1 )   61 - 7   2006年5月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We demonstrate the application of an assay technique for the detection of ATP efflux from the cell surface. Until recently, the firefly luciferase assay has conventionally been used to detect ATP release because of its high sensitivity and wide detection ability. However, since this technique can be used only to infer the amount of diffused ATP in bulk solutions, it does not accurately reflect the dynamic ATP flux at the cell membrane. We therefore constructed luciferase fusion proteins that could be immobilized onto the cell surface. However, the low activities and limited application ranges of these proteins prompted us to use biotinylated luciferase given its attributes of strong and stable localization. Furthermore, luciferase can be immobilized strongly onto the biotinylated cell surface via streptavidin-biotin binding and can thus be used to determine the dynamic release of ATP near the cell surface.

    PubMed

    researchmap

  • Glucose oxidase assisted homogeneous electrochemical receptor binding assay for drug screening. 査読 国際誌

    Funabashi Hisakage, Tanaka Yasuhiro, Imamura Yoshimasa, Mie Masayasu, Manabe Takashi, Tanaka Hiroshi, Takahashi Takashi, Handa Hiroshi, Aizawa Masuo, Kobatake Eiry

    Biosensors & Bioelectronics   21 ( 9 )   1675 - 1683   2006年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :Although the idea of homogeneous electrochemical immunoassay using antibody and an electroactive modified antigen as a probe looks to be very useful for high-throughput drug screening, there have been few reports. One reason for this is the difficulty experienced making an electroactive probe, because the introduction of electroactive compounds to antigens often interferes with the antigen-antibody interaction. To apply a homogeneous electrochemical assay to drug screening, we have designed new probes referring to the information of immobilization on beads which could identify the drug receptor. FK506 (also called Tacrolimus), immunosuppressive agent is modified with ferrocene derivatives as an electron mediator between glucose oxidase and an electrode, at a non-obstructing part. One of the probes still indicated the electrochemical activity as a mediator and had the specific binding capability for FKBP12 (FK506 binding protein). The current decrease in response to the additional FKBP12, detected with constant voltage amperometry using the probe, was observed within 5 min. Then, free FK506 as a leader drug, rapamycin and cyclosporine A as unknown drugs were used as a model for dru

    DOI: 10.1016/j.bios.2005.08.002

    PubMed

    researchmap

  • Construction of epidermal growth factor fusion protein with cell adhesive activity. 査読 国際誌

    Elloumi Imen, Kobayashi Rie, Funabashi Hisakage, Mie Masayasu, Kobatake Eiry

    Biomaterials   27 ( 18 )   3451 - 3458   2006年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :A novel protein for controlling cellular functions was constructed by combining functional units of various proteins. The Arg-Gly-Asp (RGD) sequence functioning as a cell adhesive function, an epidermal growth factor (EGF) as a cell growth function, and a hydrophobic sequence (E12) as an efficient assembling function, were combined and incorporated into one molecule. The fusion protein, designated ERE-EGF, was produced in Escherichia coli and purified with affinity chromatography using a His-tag. The ERE-EGF coated on an unmodified hydrophobic surface of a cell-culture plate (through the hydrophobic E12 moiety) retained both cell adhesive activity (through the RGD sequence) and cell growth activity (through the EGF moiety).

    DOI: 10.1016/j.biomaterials.2006.02.003

    PubMed

    researchmap

  • Delivery of antibody-captured proteins into living cells using PTD-fused protein A. 査読 国際誌

    Mie Masayasu, Mori Kazuto, Funabashi Hisakage, Kobatake Eiry

    Biotechnology Letters   28 ( 15 )   1209 - 1214   2006年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :Protein transduction domain (PTD)-mediated protein delivery into animal cells is a useful technique for regulating cellular functions. Proteins captured by antibodies were delivered into living cells using an antibody/PTD-fused protein A complex. As a model protein, fluorescent-modified antibodies, captured by their respective primary antibody, were analyzed by fluorescence-activated cell sorting (FACS) which showed that the fluorescent-modified antibodies were directly delivered into cells. Peroxidase, captured by its specific antibody, was also delivered into cells and retained its activity.

    DOI: 10.1007/s10529-006-9076-9

    PubMed

    researchmap

  • Transduction of NeuroD2 protein induced neural cell differentiation. 査読 国際誌

    Noda Tomohide, Kawamura Ryuzo, Funabashi Hisakage, Mie Masayasu, Kobatake Eiry

    Journal of Biotechnology   126 ( 2 )   230 - 236   2006年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :NeuroD2, one of the neurospecific basic helix-loop-helix transcription factors, has the ability to induce neural differentiation in undifferentiated cells. In this paper, we show that transduction of NeuroD2 protein induced mouse neuroblastoma cell line N1E-115 into neural differentiation. NeuroD2 has two basic-rich domains, one is nuclear localization signal (NLS) and the other is basic region of basic helix-loop-helix (basic). We constructed some mutants of NeuroD2, ND2(Delta100-115) (lack of NLS), ND2(Delta123-134) (lack of basic) and ND2(Delta100-134) (lack of both NLS and basic) for transduction experiments. Using these proteins, we have shown that NLS region of NeuroD2 plays a role of protein transduction. Continuous addition of NeuroD2 protein resulted in N1E-115 cells adopting neural morphology after 4 days and Tau mRNA expression was increased. These results suggest that neural differentiation can be induced by direct addition of NeuroD2 protein.

    DOI: 10.1016/j.jbiotec.2006.04.021

    PubMed

    researchmap

  • Fabrication of an antibody microwell array with self-adhering antibody binding protein. 査読 国際誌

    Tanaka Gen, Funabashi Hisakage, Mie Masayasu, Kobatake Eiry

    Analytical Biochemistry   350 ( 2 )   298 - 303   2006年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :One of the promising methods of preparing antibody arrays is immobilizing antibodies with protein A or protein G, each of which binds specifically to the heavy chain constant (Fc) region of immunoglobulin G (IgG). In this system, antibody immobilization efficiency depends on the number of active Fc binding proteins that need to be immobilized on the surface. Here we have designed and constructed an Fc binding protein with a self-adhering ability that can be immobilized on the hydrophobic surface by simple adsorption. It consists of an Fc binding domain of protein G (G3) and hydrophobic domain of elastin (E72). Direct observation revealed its self-adhering ability on the hydrophobic surface. The enzyme-linked immunosorbent assay (ELISA) showed that it retained antibody binding ability on the surface. The antibody array model was prepared on a hydrophobic microwell glass slide with E72G3, which specifically detect the antigen with a sevenfold greater sensitivity than the G3-treated slide. These results suggest that the E72G3 is useful for simple and effective immobilization of antibodies and can be used to fabricate any immuno devices.

    DOI: 10.1016/j.ab.2005.12.034

    PubMed

    researchmap

  • Identification of cysteine residues critically involved in homodimer formation and protein expression of human ATP-binding cassette transporter ABCG2: a new approach using the flp recombinase system. 国際誌

    Kanako Wakabayashi, Hiroshi Nakagawa, Tatsuhiko Adachi, Isao Kii, Eiry Kobatake, Akira Kudo, Toshihisa Ishikawa

    Journal of experimental therapeutics & oncology   5 ( 3 )   205 - 22   2006年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Since ABCG2 is a half-transporter in the ATP-binding cassette (ABC) transporter family, it has been suspected that ABCG2 functions as a homodimer. In the present study, we have investigated the molecular mechanism underlying homodimer formation of ABCG2. Based on the amino acid sequence of ABCG2, three cysteine residues (Cys592, Cys603, and Cys608) are expected to exist in the extracellular loop. To identify a cysteine residue(s) required for homodimer formation, we have substituted those cysteine residues to glycine by site-directed mutagenesis and stably expressed the resulting variants in Flp-In-293 cells. Substitution of the amino acid at position 603 from cysteine to glycine (C603G) completely diminished homodimer formation, whereas substitution of both Cys592 and Cys608 to glycine residues (C592G/C608G) had no effect on homodimer formation. These results strongly suggest that Cys603 is prerequisite for homodimer formation of ABCG2 via a disulfide bond. On the other hand, immunohistochemistry experiments revealed that the C592G/C608G variant is mainly located in intracellular compartments. The C592G/C608G variant exhibited lower activity of ATP-dependent methotrexate (MTX) transport, and its expression did not confer Flp-In-293 cells resistance to SN-38 or mitoxantrone. Cys592 and Cys608 appear to be important for intracellular sorting of the de novo synthesized ABCG2 protein to the plasma membrane. Taken together, cysteine residues in the extra-cellular loop are considered to play pivotal roles in homodimer formation and plasma membrane localization of ABCG2.

    PubMed

    researchmap

  • Activity-based in vitro selection of T4 DNA ligase 国際誌

    TAKAHASHI Fumio, TAKAHASHI Fumio, FUNABASHI Hisakage, MIE Masayasu, ENDO Yaeta, SAWASAKI Tatsuya, AIZAWA Masuo, KOBATAKE Eiry

    ElsevierBiochemical and Biophysical Research Communications   336 ( 3 )   987 - 993   2005年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.bbrc.2005.08.200

    Scopus

    PubMed

    researchmap

  • Translational control by internal ribosome entry site in Saccharomyces cerevisiae. 国際誌

    Ayako Seino, Yasuko Yanagida, Masuo Aizawa, Eiry Kobatake

    Biochimica et biophysica acta   1681 ( 2-3 )   166 - 74   2005年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    To confirm the active involvement of the internal ribosome entry site (IRES)-dependent translation in living eukaryotes, Saccharomyces cerevisiae and HAP4 IRES were used for in vitro and in vivo experiments. Since HAP4 protein might be required for activating mRNAs transcription in yeast cells when they are released from catabolite repression, the translational efficiency of HAP4 mRNA is presumed to increase under such a condition. The in vitro experiment showed clearly that the translational mechanism was shifted from the cap-dependent to the completely IRES-dependent translation when the yeast cells were derepressed from catabolite repression. From in vivo experiment, it was confirmed that the IRES-dependent translational efficiency was in a low level at the beginning of the stationary growth phase, and was enhanced at the glucose-exhausted phase. These results indicate that yeast cells on the catabolite derepressed condition could get a large amount of HAP4 protein for the completely IRES-dependent translation, while the IRES-dependent translational efficiency is increased. It has been proven that IRES functions directing the initiation of translation in living yeast cells.

    PubMed

    researchmap

  • Electrochemical evaluation of cellular physiological status under stress in Escherichia coli with the rpoS-lacZ reporter gene. 査読 国際誌

    Funabashi Hisakage, Ishikawa Miyuki, Mie Masayasu, Takahashi Fumio, Yanagida Yasuko, Aizawa Masuo, Kobatake Eiry

    Biotechnology and Bioengineering   90 ( 4 )   509 - 515   2005年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :We developed an electrochemical detection method for evaluating cellular physiological status based on the stringent response as a means to monitor cell viability. A reporter plasmid was constructed by inserting the beta-galactosidase gene (lacZ) under the control of the rpoS promoter, and then used to transform E. coli cells. Electrochemical responses from the products catalyzed by beta-galactosidase expressed by these E. coli cells were detected using the chronoamperometric technique in a nondestructive manner. Comparisons of response currents between the relA-positive strain and relA-negative strain revealed that increases in these currents were caused by the stringent response due to the stressful alcoholic environment, and thus as a model of stressful cultivating conditions. The current was proportional to the beta-galactosidase activity assayed by a conventional method that required the destruction of cells. The cellular physiological status, which depends on the stringent response as a viability marker, therefore, could then be evaluated online with a current using the rpoS-lacZ reporter gene in the relA-positive strain without pretreatment.

    DOI: 10.1002/bit.20459

    PubMed

    researchmap

  • Method for detection of specific nucleic acids by recombinant protein with fluorescent resonance energy transfer. 査読 国際誌

    Endoh Tamaki, Funabashi Hisakage, Mie Masayasu, Kobatake Eiry

    Analytical Chemistry   77 ( 14 )   4308 - 4314   2005年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :Detection of specific nucleic acids is important to understand cellular mechanisms and functions of gene regulation. Here, we demonstrated a novel method to detect specific nucleic acids using recombinant protein and oligonucleotides. A recombinant protein YRGnC-11ad, which has a Rev-peptide between enhanced yellow fluorescent protein (EYFP) and enhanced cyan fluorescent protein (ECFP) was constructed and expressed in HeLa cells. Rev-peptide, which corresponds to amino acids 34-50 of the HIV-1 Rev protein, indicates disordered structure in solution but forms alpha-helical and elongated conformation upon binding to Rev response element RNA (RRE-RNA) and Rev-aptamer, respectively. We confirmed that YRGnC-11ad could specifically bind to RRE-RNA and Rev-aptamer in cell lysate, and fluorescent resonance energy transfer (FRET) signal was changed upon binding following the conformational change of Rev-peptide. To utilize this FRET signal change toward the detection of specific nucleic acids, we split the RRE-RNA sequence and connected to the complementary oligonucleotide for target nucleic acids. When each two oligonucleotides hybridized to an adjacent region of target nucleic acids corr

    DOI: 10.1021/ac048491j

    PubMed

    researchmap

  • Blockage of RNA polymerase II at a cyclobutane pyrimidine dimer and 6-4 photoproduct. 国際誌

    Joan Seah Mei Kwei, Isao Kuraoka, Katsuyoshi Horibata, Manabu Ubukata, Eiry Kobatake, Shigenori Iwai, Hiroshi Handa, Kiyoji Tanaka

    Biochemical and biophysical research communications   320 ( 4 )   1133 - 8   2004年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The blockage of transcription elongation by RNA polymerase II (pol II) at a DNA damage site on the transcribed strand triggers a transcription-coupled DNA repair (TCR), which rapidly removes DNA damage on the transcribed strand of the expressed gene and allows the resumption of transcription. To analyze the effect of UV-induced DNA damage on transcription elongation, an in vitro transcription elongation system using pol II and oligo(dC)-tailed templates containing a cyclobutane pyrimidine dimer (CPD) or 6-4 photoproduct (6-4PP) at a specific site was employed. The results showed that pol II incorporated nucleotides opposite the CPD and 6-4PP and then stalled. Pol II formed a stable ternary complex consisting of pol II, the DNA damage template, and the nascent transcript. Furthermore, atomic force microscopy imaging revealed that pol II stalled at the damaged region. These findings may provide the basis for analysis of the initiation step of TCR.

    PubMed

    researchmap

  • [Electrochemical methods for bioscience and biotechnology].

    Hisakage Funabashi, Eiry Kobatake

    Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme   49 ( 11 Suppl )   1749 - 53   2004年8月

     詳細を見る

    記述言語:日本語   掲載種別:研究論文(学術雑誌)  

    PubMed

    researchmap

  • Combined effect of electrical stimulation and cisplatin in HeLa cell death. 国際誌

    Masafumi Manabe, Masayasu Mie, Yasuko Yanagida, Masuo Aizawa, Eiry Kobatake

    Biotechnology and bioengineering   86 ( 6 )   661 - 6   2004年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The combined effect of electrical stimulation and cisplatin administration on HeLa cells was investigated. The combination of electric potentials (-0.5 V to 0.5 V) with 10-Hz frequency and 1000 ng/mL cisplatin decreased cancer cell viability by 32% and was more effective than either treatment given alone. Combined treatment with cisplatin and electrical stimulation also increased the number of apoptotic cells. It is shown that the efficacy of cisplatin was enhanced in electrically stimulated HeLa cells, and the addition of electrical stimulation amplified the chemotherapeutic effect of cisplatin in cervical cancer cells.

    PubMed

    researchmap

  • On-chip biosensing of estrogen receptor-alpha at single molecular level. 査読 国際誌

    Wicaksono Dedy H B, Ebihara Takashi, Funabashi Hisakage, Mie Masayasu, Yanagida Yasuko, Aizawa Masuo, Kobatake Eiry

    Biosensors & Bioelectronics   19 ( 12 )   1573 - 1579   2004年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :A novel method for detecting interaction between DNA and DNA-binding protein at single molecular level has been proposed. In this study, estrogen receptor-alpha (ER-alpha) was used for biosensing as the proof-example. A 518 bp-long (ca. 176 nm) DNA probe labeled with streptavidin at its 5'-terminus was prepared by inserting a consensus oligonucleotide sequence that binds to ER-alpha. A solution containing ER-alpha was dropped onto the Ni-treated mica substrate on which the DNA prove was previously immobilized, and it was observed by AFM. Specific binding of ER-alpha could be observed by measuring the distance between the site where binding occur, to the streptavidin label.

    DOI: 10.1016/j.bios.2003.12.028

    PubMed

    researchmap

  • Construction of streptavidin-luciferase fusion protein for ATP sensing with fixed form. 査読 国際誌

    Nakamura Makiko, Mie Masayasu, Funabashi Hisakage, Kobatake Eiry

    Biotechnology Letters   26 ( 13 )   1061 - 1066   2004年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :A fusion protein consisting of streptavidin and firefly luciferase was constructed to establish an accurate measuring technique of local ATP concentration. The fusion protein retained the binding ability of streptavidin and enzymatic activity of luciferase. Also, it could detect the concentration of antigens and could determine nanomolar concentrations of ATP in its fixed form via interactions with biotin-conjugated antibodies.

    DOI: 10.1023/B:BILE.0000032966.17759.08

    PubMed

    researchmap

  • Electrically Modulated Cellular Biodevices

    YANAGIDA Yasuko, MIE Masayasu, KOBATAKE Eiry, AIZAWA Masuo

    International Journal of the Society of Materials Engineering for Resources   12 ( 1 )   11 - 15   2004年

     詳細を見る

    記述言語:英語   出版者・発行元:日本素材物性学会  

    Living cells contain a whole set of intracellular information networks, including signal transduction pathways that control gene expression, intracellular ion influxes and cellular excitability. Stimulations by extracellular molecular messenger or physical stimuli activates these intracellular information networks, modulate physical functions. According to the special characteristics cells could be used as a part of a biological information network within biodevices. Recently, the studies about bioelectronic access to such biological informations as cellular and biomolecular signals were accelerated. This paper describes new concepts of electrochemical methods using cell-based biodevices.

    DOI: 10.5188/ijsmer.12.11

    researchmap

  • Design and construction of glutamine binding proteins with a self-adhering capability to unmodified hydrophobic surfaces as reagentless fluorescence sensing devices. 国際誌

    Akira Wada, Masayasu Mie, Masuo Aizawa, Pedro Lahoud, Anthony E G Cass, Eiry Kobatake

    Journal of the American Chemical Society   125 ( 52 )   16228 - 34   2003年12月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The chemically and genetically remodeling of proteins with ligand binding specificities can be utilized to synthesize various protein-based microsensors for detecting single biomolecules. Here, we describe the construction and characterization of fluorophore-labeled glutamine binding proteins (QBP) and derivatives coupled to the independently designed hydrophobic polypeptide (E12) that can adhere onto solid surfaces via hydrophobic interactions. The single cysteine mutant (N160C QBP) modified with the three environmentally sensitive fluorescent dyes (IAANS, acrylodan, and IANBD ester) showed increased changes in fluorescence intensity induced by glutamine binding. The use of these conjugates as reagentless fluorescence sensors enables us to determine the glutamine concentrations (0.1-50 microM) in homogeneous solution. The fusion of N160C QBP with E12, (Gly4-Ser)n spacers (GSn), and IANBD resulted in the novel fluorescence sensing elements having an adhering capability to hydrophobic surfaces of unmodified microplates. In ELISA and fluorescence experiments for the microplates treated with a series of the conjugates, IANBD-labeled N160C QBP-GS1-E12 displayed the best reproducibility in adhesion onto the hydrophobic surfaces and the precise correlation between fluorescence changes and glutamine concentrations. The performance of the biosensor-attached microplate for glutamine titrations demonstrated that the hydrophobic interaction of E12 with solid surfaces is useful for effective immobilization of proteins that need specific conformational movements in recognizing particular biomolecules. Therefore, the technique using E12 as a surface-linking domain for protein adhesion onto unmodified substrates could be applied effectively to prepare microplates/arrays for a wide variety of high-throughput assays on chemical and biological samples.

    PubMed

    researchmap

  • A functional study on polymorphism of the ATP-binding cassette transporter ABCG2: critical role of arginine-482 in methotrexate transport. 国際誌

    Hideyuki Mitomo, Ryo Kato, Akiko Ito, Shiho Kasamatsu, Yoji Ikegami, Isao Kii, Akira Kudo, Eiry Kobatake, Yasuhiro Sumino, Toshihisa Ishikawa

    The Biochemical journal   373 ( Pt 3 )   767 - 74   2003年8月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Overexpression of the ATP-binding cassette transporter ABCG2 reportedly causes multidrug resistance, whereas altered drug-resistance profiles and substrate specificity are implicated for certain variant forms of ABCG2. At least three variant forms of ABCG2 have been hitherto documented on the basis of their amino acid moieties (i.e., arginine, glycine and threonine) at position 482. In the present study we have generated those ABCG2 variants by site-directed mutagenesis and expressed them in HEK-293 cells. Exogenous expression of the Arg(482), Gly(482), and Thr(482) variant forms of ABCG2 conferred HEK-293 cell resistance toward mitoxantrone 15-, 47- and 54-fold, respectively, as compared with mock-transfected HEK-293 cells. The transport activity of those variants was examined by using plasma-membrane vesicles prepared from ABCG2-overexpressing HEK-293 cells. [Arg(482)]ABCG2 transports [(3)H]methotrexate in an ATP-dependent manner; however, no transport activity was observed with the other variants (Gly(482) and Thr(482)). Transport of methotrexate by [Arg(482)]ABCG2 was significantly inhibited by mitoxantrone, doxorubicin and rhodamine 123, but not by S -octylglutathione. Furthermore, ABCG2 was found to exist in the plasma membrane as a homodimer bound via cysteinyl disulphide bond(s). Treatment with mercaptoethanol decreased its apparent molecular mass from 140 to 70 kDa. Nevertheless, ATP-dependent transport of methotrexate by [Arg(482)]ABCG2 was little affected by such mercaptoethanol treatment. It is concluded that Arg(482) is a critical amino acid moiety in the substrate specificity and transport of ABCG2 for certain drugs, such as methotrexate.

    PubMed

    researchmap

  • The secretory response through electric stimulation of differentiated PC12 rat pheochromocytoma cells transfected with neuropeptide Y fused with enhanced green fluorescent protein. 国際誌

    Atsushi Mizuno, Masayasu Mie, Yasuko Yanagida, Masuo Aizawa, Eiry Kobatake

    Biotechnology letters   25 ( 7 )   547 - 52   2003年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Exocytosis in pheochromocytoma cells was induced by electric stimulation. To chase the movement of vesicles by electric stimulation, dense-core secretory vesicles were visualized by expression of the fusion protein between neuropeptide Y and enhanced green fluorescent protein (EGFP) in these differentiated PC12 rat pheochromocytoma cells. When the cells were stimulated with constant voltage potential at -300 mV, the movement of dense-core secretory vesicles could be regulated.

    PubMed

    researchmap

  • A biosensing system based on extracellular potential recording of ligand-gated ion channel function overexpressed in insect cells. 国際誌

    Tetsuya Haruyama, Saknan Bongsebandhu-Phubhakdi, Ibuki Nakamura, David Mottershead, Kari Keinänen, Eiry Kobatake, Masuo Aizawa

    Analytical chemistry   75 ( 4 )   918 - 21   2003年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We have used outer cell potential measurement to record agonist-dependent cellular responses in cells engineered to express ligand-gated ion channels and grown on a microelectrode surface. Application of glutamate, a natural agonist, induced a complex and robust potentiometric response in cells expressing homomeric GluR-D glutamate receptor, but not in nonexpressing control cells. The response consisted of an initial decrease in outer potential followed by a transient increase and was not obtained for other amino acids devoid of agonist activity at glutamate receptors. Furthermore, the pharmacological agonist of the GluR-D receptor, kainate, also produced the potentiometric response whereas 6-cyano-7-nitroquinoxaline-2,3-dione, a competitive antagonist, was not active in itself but attenuated the responses to glutamate. The time course of the measured changes was slow, which may be partially due to the ligand being applied by free diffusion but may also reflect a contribution by secondary changes in the behavior of the cells. This novel approach should be applicable to other ligand-gated ion channels and holds promise as a cell-based biosensor for high-throughput drug screening and other applications.

    PubMed

    researchmap

  • Induction of neural differentiation by electrically stimulated gene expression of NeuroD2. 国際誌

    Masayasu Mie, Tamaki Endoh, Yasuko Yanagida, Eiry Kobatake, Masuo Aizawa

    Journal of biotechnology   100 ( 3 )   231 - 8   2003年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Regulation of cell differentiation is an important assignment for cellular engineering. One of the techniques for regulation is gene transfection into undifferentiated cells. Transient expression of NeuroD2, one of neural bHLH transcription factors, converted mouse N1E-115 neuroblastoma cells into differentiated neurons. The regulation of neural bHLH expression should be a novel strategy for cell differentiation. In this study, we tried to regulate neural differentiation by NeuroD2 gene inserted under the control of heat shock protein-70 (HSP) promoter, which can be activated by electrical stimulation. Mouse neuroblastoma cell line, N1E-115, was stably transfected with expression vector containing mouse NeuroD2 cDNA under HSP promoter. Transfected cells were cultured on the electrode surface and applied electrical stimulation. After stimulation, NeuroD2 expression was induced, and transfected cells adopt a neuronal morphology at 3 days after stimulation. These results suggest that neural differentiation can be induced by electrically stimulated gene expression of NeuroD2.

    PubMed

    researchmap

  • Cellular biosensing system for assessing immunomodulating effects on the inducible nitric oxide synthase (iNOS) cascade. 査読 国際誌

    Kamei K, Haruyama T, Mie M, Yanagida Y, Kobatake E, Aizawa M

    Biotechnology letters   25 ( 4 )   321 - 325   2003年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1023/A:1022339929026

    PubMed

    researchmap

  • Intracellular delivery of antibodies using TAT fusion protein A. 査読 国際誌

    Mie Masayasu, Takahashi Fumio, Funabashi Hisakage, Yanagida Yasuko, Aizawa Masuo, Kobatake Eiry

    Biochemical and Biophysical Research Communications   310 ( 3 )   730 - 734   2003年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :Internalization of antibodies into mammalian cells is a useful method for analyzing and regulating cellular function. In this study, we developed a novel method for the delivery of antibodies into cells using the TAT-fused protein. This fusion protein consists of two functional domains, the protein transduction domain of HIV-1 TAT and the B domain of staphylococcal protein A (SpA), which has an ability to bind to the IgG. The TAT-SpA fusion protein was mixed with fluorescence-labeled rabbit IgG and added to cells. The internalization of antibody was analyzed using confocal microscopy and flow cytometry in living cells. As a result, fluorescence-labeled IgG with the TAT-SpA fusion protein was observed intracellularly. Flow cytometry results demonstrated time course and dose dependence relationships of antibody internalization. These results suggest that the TAT-SpA fusion protein can be a useful reagent for the delivery of antibody into cells.

    DOI: 10.1016/j.bbrc.2003.09.071

    PubMed

    researchmap

  • Atomic force microscopy identification of transcription factor NFkappaB bound to streptavidin-pin-holding DNA probe. 国際誌

    Gi Hun Seong, Yasuko Yanagida, Masuo Aizawa, Eiry Kobatake

    Analytical biochemistry   309 ( 2 )   241 - 7   2002年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel method for identifying DNA-binding proteins from image analysis using AFM was developed. Here, transcription factor NFkappaB, which a well-studied example of transcription activator proteins, was used as a target protein. 5'-biotinlynated double-stranded DNA probe was labeled site specifically through high affinity with streptavidin. When the biotinylated DNA fragments were incubated with the streptavidin at a 1:2 molar ratio of DNA:streptavidin, the overall efficiency of labeling was over 90%. The double-stranded DNA probes were immobilized on a mica surface by the adsorption of streptavidin that attached to the 5'-end of DNA and applied for selection of the target protein NFkappaB in solution and then AFM was used to image the DNA probe-NFkappaB complexes. The length of the distance between 5'-labeled streptavidin and NFkappaB bound on DNA probes from AFM images is 0.64, the normalized position of the NFkappaB binding site, and this result is in close agreement with the expected 299 and 167bp values.

    PubMed

    researchmap

  • Ribosome display for selection of active dihydrofolate reductase mutants using immobilized methotrexate on agarose beads. 国際誌

    Fumio Takahashi, Takashi Ebihara, Masayasu Mie, Yasuko Yanagida, Yaeta Endo, Eiry Kobatake, Masuo Aizawa

    FEBS letters   514 ( 1 )   106 - 10   2002年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Ribosome display was applied to the selection of an enzyme. As a model, we selected and amplified the dihydrofolate reductase (DHFR) gene by ribosome display utilizing a wheat germ cell-free protein synthesis system based on binding affinity to its substrate analog, methotrexate, immobilized on agarose beads. After three rounds of selection, the DHFR gene could be effectively selected and preferentially amplified from a small proportion in a mixture also containing competitive genes. Active enzymes were expressed and amplified and by sequence analysis, four mutants of DHFR were identified. These mutants showed as much activity as the wild-type enzyme.

    PubMed

    researchmap

  • Cellular biosensing system for discovery of protein synthesis inhibitors with an electrochemical phosphate modulator to regulate the acid phosphatase gene expression of Saccharomyces cerevisiae. 国際誌

    Tetsuya Haruyama, Eiry Kobatake, Masuo Aizawa

    Biosensors & bioelectronics   17 ( 3 )   209 - 15   2002年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A cellular biosensing system for screening protein synthesis inhibitors has been developed by linking an electrochemical phosphate modulator and matrix-immobilized yeast cells with an optical sensing device. To screen the protein synthesis inhibitors, yeast phosphatase gene regulating system has been employed by linking an electrochemical phosphate modulator. Since the yeast phosphatase gene coding gammaAPase is expressed, when the phosphate concentration in solution is lowered below the threshold, the gammaAPase production is triggered by lowering the phosphate concentration with the electrochemical phosphate modulator, and monitored continuously with the photometric device. The electrochemical phosphate modulator was assembled with matrix-immobilized yeast cells. The module could insert to ordinal cuvette to monitor the induced gammaAPase activity in an ordinal photometer. Using the system, induction profile of protein synthesis was easily observed and was affected remarkably by various protein synthesis inhibitors. This seems promising that the system can be applied for first screening process of de novo protein inhibitors. The cellular biosensing system seems promising in screening protein synthesis inhibitors.

    PubMed

    researchmap

  • Direct atomic force microscopy visualization of integration host factor-induced DNA bending structure of the promoter regulatory region on the Pseudomonas TOL plasmid. 国際誌

    Gi Hun Seong, Eiry Kobatake, Koshiro Miura, Atsushi Nakazawa, Masuo Aizawa

    Biochemical and biophysical research communications   291 ( 2 )   361 - 6   2002年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Atomic force microscopy (AFM) was used to analyze DNA bending induced by integration host factor (IHF). The direct AFM visualization of IHF-DNA complexes on the OP1 promoter regulatory regions on the Pseudomonas TOL plasmid showed that there was no intrinsic DNA bend in the OP1 promoter region, but a sharp DNA bend was induced by binding of IHF to the region between the upstream regulatory sequence and the promoter sequence. The DNA bending angles were distributed with a mean bend angle of 123 degrees. The IHF-DNA complexes were shown to bend at the IHF binding site giving rise to an asymmetric structure. These results provide direct evidence that IHF is required functionally for activation of OP1 transcription and support the DNA-loop model that the sharp DNA bend induced by binding of IHF facilitates the contact between RNA polymerase bound by the promoter sequence and XylR protein attached to the upstream sequence in the OP1 promoter.

    PubMed

    researchmap

  • Non-destructive monitoring of rpoS promoter activity as stress marker for evaluating cellular physiological status. 査読 国際誌

    Funabashi Hisakage, Haruyama Tetsuya, Mie Masayasu, Yanagida Yasuko, Kobatake Eiry, Aizawa Masuo

    Journal of Biotechnology   95 ( 1 )   85 - 93   2002年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    :To monitor the extent of cellular physiological stress, the activity of the rpoS promoter was evaluated as a marker of the stress pathway. A reporter plasmid was constructed by inserting the GFPuv gene under the rpoS promoter and used to transform Escherichia coli cells. The fluorescence of the GFPuv protein was measured in intact cells in a non-destructive manner. The physiological status of the cells could be conveniently monitored using the rpoS-GFPuv reporter gene with respect to the cellular growth phase and to elevated ethanol and NaCl concentrations as two examples of environmental stress factors. Comparison of the response of different E. coli strains demonstrated an essential role of the relA gene in the induction of the rpoS-GFPuv reporter gene.

    DOI: 10.1016/S0168-1656(01)00446-1

    PubMed

    researchmap

  • Cellular sensing devices for assessing chemicals 査読

    M Aizawa, K Kamei, T Haruyama, E Kobatake

    PROCEEDINGS OF THE 23RD ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY, VOLS 1-4   23   3021 - 3022   2001年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(国際会議プロシーディングス)  

    Web of Science

    researchmap

  • Genetically fused protein A-luciferase for immunological blotting analyses. 国際誌

    X M Zhang, E Kobatake, K Kobayashi, Y Yanagida, M Aizawa

    Analytical biochemistry   282 ( 1 )   65 - 9   2000年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The gene expression plasmid pMALU5 for the fusion protein of protein A (SpA) with a complete sequence of firefly luciferase (Luc) was constructed. The fused gene was expressed in Escherichia coli, and the resulting SpA-Luc fusion protein was purified by one-step affinity chromatography on IgG-Sepharose. The protein retained both activities: IgG binding capability of protein A and enzymatic activity of luciferase. Blotting analyses were performed with the fusion protein to determine a tumor marker of alpha-fetoprotein (AFP). AFP was detected at the lowest detection limit of 5 pg by dot blotting and Western blotting. The SpA-Luc fusion protein provides a highly selective, sensitive, and versatile marker for blotting analyses.

    PubMed

    researchmap

  • Electrically stimulated induction of hsp70 gene expression in mouse astroglia and fibroblast cells. 国際誌

    Y Yanagida, A Mizuno, T Motegi, E Kobatake, M Aizawa

    Journal of biotechnology   79 ( 1 )   53 - 61   2000年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Mouse astroglial cells, which were cultured on an electrode, were found responsive to an electric stimulation of sine wave potential in enhancing hsp70 mRNA resulting from an activation of hsp70 gene expression. On the basis of this finding, electrically responsive cells were established by transfecting mouse 3T3-L1 cells with a constructed plasmid encoding hsp70 promoter and the firefly luciferase gene. A stable cell line has been established through selection of heat-stimulated luciferase expression. A 1-h electric stimulation of the cells resulted in activation of luciferase expression, which was confirmed to produce an increase in light emission. The sequential pattern of the electrically stimulated expression of luciferase was found different from that of the heat stimulation. Furthermore, the promoter was activated depending on the potential and duration of the stimulation applied. Consequently, the electric stimulation has proven effective on activating hspP70 promoter. This cell line is feasible in expressing the gene of interest by electrical stimulation, which lead us to construct environment responsive cells in general.

    PubMed

    researchmap

  • Single-molecular AFM probing of specific DNA sequencing using RecA-promoted homologous pairing and strand exchange. 国際誌

    G H Seong, T Niimi, Y Yanagida, E Kobatake, M Aizawa

    Analytical chemistry   72 ( 6 )   1288 - 93   2000年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The specific sequence in a linearlized double-stranded DNA target has been identified at a single-molecular level by atomic force microscopy (AFM). This was accomplished using RecA-coated, single-stranded DNA probes which were paired with a specific complementary DNA sequence in a linear double-stranded DNA target by strand-exchange reaction at a homologous sequence site with target DNA. The sites of interaction between the nucleoprotein filaments and the double-stranded DNA targets were directly visualized by AFM in solution containing 4 mM magnesium acetate. Measurements of the position of RecA-coated probes paired to individual target DNA showed that DNA probes specifically paired at their corresponding homologous target sequences. Strand exchange promoted by RecA and the visualization by AFM provided a rapid and efficient way to identify homologous sequence on a single-molecule target DNA.

    PubMed

    researchmap

  • Osteogenesis coordinated in C3H10T1/2 cells by adipogenesis-dependent BMP-2 expression system. 国際誌

    M Mie, H Ohgushi, Y Yanagida, T Haruyama, E Kobatake, M Aizawa

    Tissue engineering   6 ( 1 )   9 - 18   2000年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel tissue engineering for bone formation has been proposed, to make osteoblast differentiation balanced by transfecting the mesenchymal stem cells with a gene encoding human bone morphogenetic protein-2 (hBMP-2) under the control of adipocyte specific lipoprotein lipase (LPL) promoter. Due to the promoter specificity, the initiation of BMP transcription is dependent on adipogenesis. For 14-day culture in the presence of ascorbic acid (asc) and beta-glycerophosphate (gly), nontransfected mouse embryonic fibroblast C3H10T1/2 (10T1/2) cells showed extensive accumulation of lipid droplets and adipocyte specific enzyme glycerol-3-phosphate dehydrogenase (G3PDH) mRNA expression, but exhibited neither BMP-2 expression, high alkaline phosphatase (ALP) activity which reflects osteoblast phenotype. On the other hand, transfected 10T1/2 cells showed hBMP-2 expression, high ALP activity and low level of G3PDH. mRNA expression accompanied with minimal lipid droplets. These results indicate that 10T1/2 cells are proved to be differentiated with maintaining coordinated balance of adipogenesis and osteogenesis, when they are transfected by the gene encoding hBMP-2 under the control of LPL promoter.

    PubMed

    researchmap

  • Assembling of engineered IgG-binding protein on gold surface for highly oriented antibody immobilization. 国際誌

    S Kanno, Y Yanagida, T Haruyama, E Kobatake, M Aizawa

    Journal of biotechnology   76 ( 2-3 )   207 - 14   2000年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The B-domain, which is one of IgG-binding domains of staphylococcal protein A, was repeated five times and a cysteine residue was introduced at its C-terminus by a genetic engineering technique. The resulting protein, designated B5C1, retained the same IgG-binding activity as native protein A. The B5C1 was assembled on a gold plate surface by utilizing a strong affinity between thiol of cysteine and a gold surface. IgG-binding activity of B5C1 on a gold surface was much higher than that of physically adsorbed B5, which lacks cysteine residue. Furthermore, antigen-binding activity of immobilized antibody molecules through the use of assembled B5C1 on a gold surface was about 4.3 times higher than that of physically adsorbed antibody molecules. Immobilization of highly oriented antibody molecules was realized with the engineered IgG-binding protein.

    PubMed

    researchmap

  • Design and gene engineering synthesis of an extremely thermostable protein with biological activity. 国際誌

    E Kobatake, K Onoda, Y Yanagida, M Aizawa

    Biomacromolecules   1 ( 3 )   382 - 6   2000年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel strategy for designing and synthesizing extremely thermostable biologically active proteins is proposed. The design concept is based on combining a rigid and extremely hydrophobic peptide unit with a biologically active peptide unit. The cell adhesive peptide sequence, Arg-Gly-Asp (RGD), as a functional peptide unit was incorporated into the elastin-based rigid polyhexapeptide, whose repeating unit is Ala-Pro-Gly-Val-Gly-Val (APGVGV). The designed fusion gene was expressed in E. coli, and the resulting protein, designated ER4, was purified with affinity chromatography. The ER4-coated cell culture plate showed sufficient cell adhesive activity through the RGD sequence on the surface of ER4. The thermostability of ER4 was demonstrated by estimating the remaining cell adhesive activity after autoclaving at 120 degrees C for 20 min, and it retained over 90% of cell adhesive activity compared with native ER4.

    PubMed

    researchmap

  • Genetically synthesized antibody-binding protein self-assembled on hydrophobic matrix. 国際誌

    T Sugihara, G H Seong, E Kobatake, M Aizawa

    Bioconjugate chemistry   11 ( 6 )   789 - 94   2000年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A unique antibody-binding protein, (E12B2)n, was genetically synthesized, which was characterized by a hydrophobic peptide, E12, at one terminus and an antibody-binding peptide, B2, at the other. It was clarified by atomic force microscopy (AFM) imaging that this protein was efficiently self-assembled on a hydrophobic solid surface. (E12B2)n self-assembled on a microplate exhibited an excellent performance of antibody-binding affinity. The proposed design of antibody-binding protein seems promising in immobilizing antibody molecules on hydrophobic solid surfaces.

    PubMed

    researchmap

  • In vitro selective RNA synthesis with L-A virus nanoparticles. 国際誌

    T Ebihara, Y Yanagida, E Kobatake, M Aizawa

    Biochemical and biophysical research communications   263 ( 1 )   23 - 7   1999年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    New in vitro RNA synthesis has been performed with an L-A virus nanoparticles, in which the gene and polymerase are integrated. The specific recognition sequence (packaging site) of L-A virus was inserted within a gene of interest. Based on the intrinsic replication cycle, the exogenous RNA with the packaging site was encapsulated by an empty L-A virus nanoparticle. The packaging site worked as a recognition site even for exogenous RNAs. The recognized RNA was replicated to dsRNA, and was then transcribed by empty L-A virus nanoparticles. These results indicate that empty L-A virus nanoparticles recognize an exogenous RNA with the packaging site and synthesize RNA in vitro.

    PubMed

    researchmap

  • Stabilization and translation of immobilized mRNA on latex beads for cell-free protein synthesis system. 国際誌

    E Kobatake, A Ebisawa, O Asaka, Y Yanagida, Y Ikariyama, M Aizawa

    Applied biochemistry and biotechnology   76 ( 3 )   217 - 27   1999年3月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The stability of immobilized mRNA against ribonucleases was investigated in a cell-free protein synthesis system. The plasmid-encoding protein A with the 20-mer poly(A) tail under the control of T7 promoter was constructed, and the corresponding mRNA was synthesized by T7 RNA polymerase reaction. The resulting mRNA was immobilized on oligo(dT)-immobilized latex beads by hybridization utilizing the poly(A) tail of mRNA at the 3'-terminus. The mRNA was stabilized against three types of nucleases (3'-OH exonuclease, 5'-OH exonuclease, and endonuclease) by immobilization. Translation of immobilized mRNA with a continuous-flow cell-free protein-synthesizing system from Saccharomyces cerevisiae was ascertained. Reusability of the immobilized mRNA as genetic information was also examined.

    PubMed

    researchmap

  • Detection of local ATP release from activated platelets using cell surface-attached firefly luciferase. 国際誌

    R Beigi, E Kobatake, M Aizawa, G R Dubyak

    The American journal of physiology   276 ( 1 )   C267-78   1999年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We have developed a method for measuring the local concentration of ATP at the extracellular surface of live cells. This method relies on the specific attachment to the cell surface of a chimeric protein that consists of the IgG-binding domain of Staphylococcus aureus protein A fused in-frame with the complete sequence for firefly luciferase (proA-luc). Expression of proA-luc in Escherichia coli and its one-step affinity purification are straightforward. Attachment to cells is demonstrated to be specific and antibody dependent using several suspended and adherent cell types. Light production by cell surface-attached luciferase is continuous, linearly related to ATP concentration, and sufficient to provide nanomolar sensitivity. The spatial resolution of this method enables the observation of strictly local changes in extracellular ATP during its secretion from activated platelets. Furthermore, the activity of cell-attached luciferase is relatively refractory to the inclusion of nucleotidases in the medium, arguing for its effectiveness in cell systems possessing potent ecto-ATPases.

    DOI: 10.1152/ajpcell.1999.276.1.C267

    PubMed

    researchmap

  • Site-directed lipid modification of IgG-binding protein by intracellular bacterial lipoprotein process 国際誌

    SHIGEMATSU H, EBIHARA T, YANAGIDA Y, HARUYAMA T, KOBATAKE E, AIZAWA M

    J. Biotechnol.   75 ( 1 )   23 - 31   1999年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/S0168-1656(99)00134-0

    PubMed

    researchmap

  • Bioluminescent monitoring of intracellular ATP during fermentation. 国際誌

    H Funabashi, T Imajo, J Kojima, E Kobatake, M Aizawa

    Luminescence : the journal of biological and chemical luminescence   14 ( 6 )   291 - 6   1999年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The luciferase gene was introduced as a probe into a cell in order to develop a bioluminescent monitoring of intracellular ATP during fermentation. Two plasmids were constructed with two types of promoters. One was pLac-Luc, which had the luciferase gene under the lac promoter to be expressed at a high level. The other was pTet-Luc, which had the luciferase gene under the tetracycline promoter to be stably expressed. A threonine-overproducing strain of Escherichia coli (No. 29-4) was transformed with each plasmid. The recombinant E. coli strains were characterized in their growth, threonine production and luciferase expression. The bioluminescence produced intracellularly from expressed luciferase was detected during fermentation -in a non-destructive manner. The bioluminescent intensity reflected both intracellular ATP and luciferase levels, and the results indicate that stable expression of a luciferase reporter is essential for monitoring intracellular ATP.

    PubMed

    researchmap

  • Two types of electrochemical nitric oxide (NO) sensing systems with heat-denatured Cyt C and radical scavenger PTIO. 国際誌

    T Haruyama, S Shiino, Y Yanagida, E Kobatake, M Aizawa

    Biosensors & bioelectronics   13 ( 7-8 )   763 - 9   1998年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    To develop an in situ NO sensing system for primarily biological and medical uses, two types of NO sensing materials, which may be coupled with an electrochemical reaction for signal transduction, have been investigated. Heat-denatured Cyt C and a radical scavenger 2-(4-carboxyphenyl)-4,4,5,5-tetra methyl imidazoline-1-oxyl-3-oxide (C-PTIO) were found to be effective and were incorporated into electrochemical sensing systems. Heat-denatured Cyt C deposited on a 4-mercaptopyridine modified gold electrode responded to NO with an increase of cathodic current through electrochemical reduction of Cyt C (Fe3+), when the electrode potential was controlled at 0 mV vs Ag/AgCl. The dynamic range of the sensing system was 0.5-4 microM. The sensing system with C-PTIO exhibited an anodic output in response to NO at 0.7 V vs Ag/AgCl, and showed a wider dynamic range from 0.05 to 100 microM.

    PubMed

    researchmap

  • Gene expression in the electrically stimulated differentiation of PC12 cells. 国際誌

    K Kimura, Y Yanagida, T Haruyama, E Kobatake, M Aizawa

    Journal of biotechnology   63 ( 1 )   55 - 65   1998年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Cell differentiation of PC12 cells was electrically induced to grow neurites in the absence of nerve growth factor (NGF) on the electrode surface, of which potential was modulated by a rectangular wave of potential. The electric stimulation induced the c-fos expression which is essential for cell differentiation. Non-specific calcium channel blocker, lanthanum ion, inhibited the electrically induced differentiation, while NGF-induced differentiation was not suppressed. An L-type calcium channel blocker, nifedipine, also inhibited the electrically induced calcium influx and c-fos expression. Moreover, a stretch-activated (SA) channel blocker, gadolinium ion, inhibited the electrically stimulated differentiation by blocking the calcium influx, but gave no prominent effects on the potassium ion-induced differentiation. Chelerythrine, a specific protein kinase C (PKC) inhibitor, almost inhibited the cell differentiation by the electric stimulation but not by the NGF treatment. These results indicate that the alternative potential may stimulate cell differentiation through a PKC cascade.

    PubMed

    researchmap

  • Electrically induced neurite outgrowth of PC12 cells on the electrode surface. 国際誌

    K Kimura, Y Yanagida, T Haruyama, E Kobatake, M Aizawa

    Medical & biological engineering & computing   36 ( 4 )   493 - 8   1998年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Morphological differentiation of PC12 cells cultured on an indium-tin oxide (ITO) electrode has been induced to grow neurites in the absence of nerve growth factor (NGF) by electrical stimulation. Rectangular pulse wave potentials were applied to the electrode at amplitudes of 200 mV and 400 mV with frequencies of 50 Hz, 500 Hz, and 1 kHz. The PC12 cells differentiated most prominently at 200 mV with 100 Hz. No statistically significant differences were observed among the electrically induced neurite lengths. The electrically induced differentiation was completely inhibited by a blockade of calcium influx using LaCl3. This indicates that repeated potential shift in the vicinity of a cellular membrane may stimulate morphological response, probably through calcium ion channels.

    PubMed

    researchmap

  • Use of a quartz crystal microbalance to monitor immunoliposome--antigen interaction. 国際誌

    K Yun, E Kobatake, T Haruyama, M L Laukkanen, K Keinänen, M Aizawa

    Analytical chemistry   70 ( 2 )   260 - 4   1998年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We have used quartz crystal microbalance (QCM)-based real-time biospecific interaction measurement to analyze the binding of immunoliposomes to antigen and examined the use of liposomes as signal-enhancing reagents in competitive QCM immunoassay. For the preparation of immunoliposomes, various amounts of bacterially produced lipid-tagged single-chain antibody against 2-phenyloxazolone were incorporated in phosphatidylcholine liposomes. The immunoliposomes bound specifically to immobilized hapten, and this binding was inhibited by soluble hapten in a concentration-dependent manner. In this competitive assay, antigen could be measured in the concentration range from 10(-5) to 10(-8) M.

    PubMed

    researchmap

  • Electrochemical nitric oxide (NO) sensing system with spin-trap reagent PTIO 査読

    T Haruyama, K Kamei, E Kobatake, Y Yanagida, M Aizawa

    TECHNICAL DIGEST OF THE SEVENTH INTERNATIONAL MEETING ON CHEMICAL SENSORS   259 - 261   1998年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(国際会議プロシーディングス)  

    Web of Science

    researchmap

  • Fiber-optic-based biomonitoring of benzene derivatives by recombinant E. coli bearing luciferase gene-fused TOL-plasmid immobilized on the fiber-optic end. 国際誌

    Y Ikariyama, S Nishiguchi, T Koyama, E Kobatake, M Aizawa, M Tsuda, T Nakazawa

    Analytical chemistry   69 ( 13 )   2600 - 5   1997年7月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    TOL plasmid in Pseudomonas putida mt-2 has a series of genes for the degradation of xylene, toluene, and their derivatives to pyruvate and acetaldehyde (or propionaldehyde). Two operons, i.e., upper operon and meta operon, play indispensable roles for the digestion of xylene derivatives: When XyIR protein recognizes xylene derivatives, another controlling gene, xyIS, is activated, which results in the activation of meta operon. Therefore, we have constructed a fusion gene between TOL plasmid and the firefly luciferase gene under the control of XyIR and the promoter of xyIS gene; i.e., by using fusions of the meta operon with promotorless luciferase expression vector from firefly, we have constructed and tested biomonitors for benzene derivatives. Bioluminescence specified by Escherichia coli (pTSN316), carrying xyIR and xyIS promoters, Ampr and luc, was measured in either a benzene derivative-saturated or o-methylbenzyl alcohol-dissolved medium both in the case of cell suspension and in the case of immobilized cell form. The utility of the biosensing system for monitoring in chemical plant drainage was demonstrated with samples supplemented with benzene derivatives. The xyIR-xyIS promoter-lux fusion carried by pTSN316 responded to a benzene-related chemical in sample solutions. Immobilization of the transformed E. coli, at one end of fiber optic, bearing firefly luciferase gene fused to TOL plasmid, has been demonstrated to fabricate a luminescent remote biomonitoring device for the protection of environmental deterioration. Due to the luminescent detection, the detection limits for benzene-related aromatics that are recognized by a binding protein (XyIR) were parts-per-million. We had already submitted a preliminary report concerning the possibility of environmental monitoring based on the above idea by using the transformed E. coli in a cell-suspended solution. This paper describes mainly a fiber-optic-based biomonitoring device for the protection of environmental deterioration.

    PubMed

    researchmap

  • Self-assembling of glutathione S-transferase/calmodulin fusion protein on chemically modified gold surface. 国際誌

    N Damrongchai, K Yun, E Kobatake, M Aizawa

    Journal of biotechnology   55 ( 2 )   125 - 33   1997年6月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The fusion protein technique was used to prepare an artificial polyfunctional protein from calmodulin (CaM) and glutathione S-transferase (GST). The fusion protein was designed, expressed, and then assembled to the glutathione self-assembled gold surface. The protein assembly was confirmed through enzyme binding assay and enzyme immunoassay. Specific binding of the fusion protein to glutathione self-assembled on the gold surface was assessed via a quartz crystal microbalance (QCM). The fusion protein was reversibly adsorbed and desorbed by the competitive binding of glutathione present in a solution, thus showing that the binding of the fusion protein was specific and had a highly oriented molecular configuration.

    PubMed

    researchmap

  • A fluoroimmunoassay based on immunoliposomes containing genetically engineered lipid-tagged antibody. 国際誌

    E Kobatake, H Sasakura, T Haruyama, M L Laukkanen, K Keinänen, M Aizawa

    Analytical chemistry   69 ( 7 )   1295 - 8   1997年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Immunoliposomes were prepared by using biosynthetically lipid-tagged anti-2-phenyloxazolone single-chain antibody. Carboxyfluorescein as a fluorescent marker was encapsulated in the immunoliposomes. Some conditions for fluoroimmunoassay using the immunoliposomes were optimized by binding assays with hapten-coated microtiter wells. A competitive fluoroimmunoassay for the caproic acid conjugate of 2-phenyloxazolone as a model antigen was performed with the immunoliposomes. In the optimized assay conditions, antigen could be determined in the concentration range from 10(-7) to 10(-9) M.

    PubMed

    researchmap

  • Electrically induced NGF production by astroglial cells. 国際誌

    S Koyama, T Haruyama, E Kobatake, M Aizawa

    Nature biotechnology   15 ( 2 )   164 - 6   1997年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A controlled culture system has been developed to induce nerve growth factor (NGF) production in astroglial cells that are cultured on an electrode surface. The electrode potential is alternatively modulated at an amplitude of 300 mV and a frequency of 10 Hz. The electric stimulation triggers NGF production and secretion. The mechanism of the electrically induced NGF production is discussed in association with protein kinase C (PKC) activation.

    PubMed

    researchmap

  • On-off switching of enzymatic reaction by recombinant calmodulin on a solid-phase matrix. 国際誌

    E Kobatake, K Mitomo, T Haruyama, M Aizawa, G Y Deng, S Kato

    Bioconjugate chemistry   7 ( 1 )   126 - 30   1996年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A fusion protein consisting of human calmodulin (CaM) and glutathione S-transferase (GST) was produced by gene fusion. The fusion protein was overexpressed in Escherichia coli as a soluble form and purified with one-step affinity chromatography using glutathione-Sepharose. The protein had the modulating activity of CaM and the binding capability to glutathione of GST. Phosphodiesterase, which is a CaM dependent enzyme, was activated by the fusion protein, with the Ca2+ level equal to the level equivalent to a native CaM. Furthermore, CaM could be immobilized on a solid-phase matrix through the use of GST moiety while its modulating activity was retained. Phosphodiesterase activity was switched on and off by the immobilized CaM with or without Ca2+, and repeated use of CaM was demonstrated.

    PubMed

    researchmap

  • Bioluminescent detection of RNA with sequence-specificity using RNA binding protein-luciferase fusion protein. 国際誌

    Y Kajita, E Kobatake, F Ishikawa, M Aizawa

    Journal of biotechnology   43 ( 1 )   63 - 70   1995年11月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel bifunctional reagent has been synthesized for RNA detection by genetic fusion of a sequence-specific RNA binding protein and firefly luciferase. The RNA binding protein used in this study recognizes the oligoribonucleotide rH4 which contains four (UUAGGG)-repeat sequence, while luciferase works as a bioluminescent marker. The constructed fusion protein exhibited both sequence-specific RNA binding and bioluminescent activities. The rH4 and rECGF, which has an unrelated sequence having the same length as rH4, were immobilized on a nylon membrane. The membrane was pre-treated by 5% bovine serum albumin and soaked into a fusion protein solution. Bioluminescent detection has successfully been performed at more than 50 pmol of rH4, so the detection limit using this protein was 50 pmol. However, no appreciable bioluminescence was induced by rECGF.

    PubMed

    researchmap

  • Production of the chimeric-binding protein, maltose-binding protein-protein A, by gene fusion. 国際誌

    E Kobatake, Y Ikariyama, M Aizawa

    Journal of biotechnology   38 ( 3 )   263 - 8   1995年1月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A fusion protein between maltose-binding protein (MBP) and staphylococcal protein A (SpA) was genetically produced. The gene fusion plasmid, pMALPA2, was constructed by inserting the protein A gene into an expression vector of maltose-binding protein in frame, and was expressed efficiently in Escherichia coli. The resulting fusion protein of molecular mass 65 kDa, retained the activity of both MBP and SpA (binding capability to amylose and immunoglobulin G). This chimeric-binding protein was used as an adhesive molecule for immobilization of antibodies to a solid-phase surface for enzyme immunoassay. An enzyme immunoassay was performed with the fusion protein, and human IgG was determined in the concentration range from 10(-4) to 10(-6) g ml-1.

    PubMed

    researchmap

  • Calcium responsive two-dimensional molecular assembling of lipid-conjugated calmodulin. 国際誌

    N Damrongchai, E Kobatake, T Haruyama, Y Ikariyama, M Aizawa

    Bioconjugate chemistry   6 ( 3 )   264 - 8   1995年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Calmodulin (CaM), a calcium ion sensitive protein, was conjugated with dioctadecyldimethylammonium bromide and subsequently assembled into a monolayer at the air-water interface using the LB method. The lipid-conjugated calmodulin (LCC) retains its calcium sensitivity, determined from the changes in the area-pressure isotherm of the monolayer obtained at the air-water interface. The functionality of this protein assembly was characterized by the activation of phosphodiesterase (PDE), a CaM responsive enzyme. The enzyme activity of PDE coupled with LCC at the air-water interface was measured by using the enzymatic method. It was found that LCC retained its enzyme activity modulating function of calmodulin, which is triggered by calcium ions. This characteristic plays an important role in fabricating molecular assembly of proteins which have a cooperative interaction at the molecular level.

    PubMed

    researchmap

  • Biosensing of benzene derivatives in the environment by luminescent Escherichia coli. 国際誌

    E Kobatake, T Niimi, T Haruyama, Y Ikariyama, M Aizawa

    Biosensors & bioelectronics   10 ( 6-7 )   601 - 5   1995年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Sensitive and convenient biosensing of environmental pollutants has been developed by fusing a gene of firefly luciferase to the TOL plasmid. TOL plasmid of Pseudomonas putida encodes a series of enzymes for degradation of benzene and its derivatives. The expression of these enzymes is controlled with the regulating proteins xylR and xylS, whose promoters are activated in the presence of aromatic compounds. The structural gene of firefly luciferase, as a reporter enzyme, was inserted under the control of the promoter of xylS protein, and gene fusion plasmid pTSN316 was constructed. The recombinant Escherichia coli transformed with this plasmid was applied to the environmental biosensing of benzene derivatives. The expression of luciferase was induced in the presence of aromatic compounds and the lower detection limit for m-xylene was 5 microM.

    PubMed

    researchmap

  • Electronically modulated biological functions of molecular interfaced enzymes and living cells. 国際誌

    M Aizawa, T Haruyama, G F Khan, E Kobatake, Y Ikariyama

    Biosensors & bioelectronics   9 ( 9-10 )   601 - 10   1994年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Conducting polymer molecular interfaces have been implemented to modulate biological functions of fructose dehydrogenase, pyruvate oxidase and Saccharomyces cerevisiae at the electrode surface by adjustment of electrode potential. The enzyme activity of the polypyrrole-interfaced fructose dehydrogenase was electronically modulated by means of electron transfer between the enzyme and the electrode surface. The enzyme activity of polypyrrole-interfaced pyruvate oxidase was modulated by an electronically driven change of substrate concentration. The gene expression in polypyrrole-interfaced Saccharomyces cerevisiae was electronically induced by a change in the phosphate concentration.

    PubMed

    researchmap

  • Stimulation of acid phosphatase induction in Saccharomyces cerevisiae by electrochemical modulation of effector concentration. 国際誌

    T Haruyama, E Kobatake, Y Ikariyama, M Aizawa

    Biotechnology and bioengineering   42 ( 7 )   836 - 42   1993年9月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A novel modulating method of the expression of Saccharomyces PHO 5 gene, responsible for acid phosphatase (APase), is proposed. The method is based on electrochemical modulation of an effector (inorganic phosphate) concentration, as the gene expression is initiated below a threshold concentration of phosphate and is terminated above the threshold value. By positioning the yeast in the close neighborhood of a conducting polymer, the authors show the effectiveness of the electrochemical approach toward PHO 5 induction. Based on the approach, phosphate concentration is easily modulated at the boundary concentration by taking advantage of anion doping-undoping at a conducting polymer and the resulting anion localization-delocalization in the polymer, as the local enrichment of phosphate in the polymer results in the lowering of phosphate in the vicinity of polypyrrole. External phosphate concentration is thus electrochemically modulated when the conducting polymer is positioned in the close neighborhood of the yeast cells; thereby the PHO gene is induced. Here an electrochemical approach for the APase expression as a strategy of selective induction of specific genetic information is described. (c) 1993 John Wiley & Sons, Inc.

    PubMed

    researchmap

  • Bioluminescent immunoassay with a protein A-luciferase fusion protein. 国際誌

    E Kobatake, T Iwai, Y Ikariyama, M Aizawa

    Analytical biochemistry   208 ( 2 )   300 - 5   1993年2月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Protein A and firefly luciferase were genetically fused and the resulting fusion protein was applied to a bioluminescent immunoassay. The gene fusion plasmid, pMALU2, was constructed by inserting the structural gene of luciferase into a protein A expression vector, and was expressed in Escherichia coli. The resulting fusion protein of molecular weight 91 kDa retained not only the enzymatic activity of luciferase but also the binding capability of protein A to the Fc region of immunoglobulin G (IgG). The bioluminescent immunoassay was performed with the fusion protein and human IgG was determined in the concentration range from 10(-3) to 10(-7) g/ml.

    PubMed

    researchmap

  • Translation of immobilized genetic information by yeast cell-free protein synthesizing system. 国際誌

    E Kobatake, Y Ikariyama, M Aizawa

    Biotechnology and bioengineering   37 ( 8 )   723 - 8   1991年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A cell-free protein-synthesizing system for the purpose of specific genetic information translation was constructed: ribosome, t-RNA, and enzymes extracted from yeast cells were combined with an immobilized mRNA. The soluble fraction mixed with energy sources and amino acids was incubated with the immobilized mRNA such as poly(U), yeast mRNA, and myeloma mRNA to incorporate [(3)H]phenylalanine into polypeptides of de novo synthesis. By supplying amino acids to these protein-synthesizing systems, amino acid incorporation was ascertained. Lower efficiency of the incorporation in the immobilized system than that of the homogeneous system was mainly attributed to the heterogeneous reaction where the mass-transfer process is diffusion limited. Results obtained show the possibility of a system for specific translation of a desired genetic code.

    PubMed

    researchmap

  • Ca(2+)-responsive extensible monolayer membrane of calmodulin-albumin conjugate. 国際誌

    T Miwa, E Kobatake, Y Ikariyama, M Aizawa

    Bioconjugate chemistry   2 ( 4 )   270 - 4   1991年

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A Ca(2+)-responsive monolayer protein membrane was prepared by developing calmodulin and bovine serum albumin at the air-water interface and by conjugating them with a bifunctional agent. In the case of the BSA monolayer, complex formation with Mg2+ generated a larger change in surface pressure than that with Ca2+. On the other hand, a drastic change in surface pressure was observed for the conjugated thin membrane associated with Ca2+ than that associated with Mg2+. Due to a drastic change in the conformation of calmodulin, the conjugated protein film changes its morphology (STM image), depending on Ca2+ concentration: the extended structure in the presence of Ca2+ transforms to a shrinked structure in the absence of Ca2+. The largest surface pressure change was detected when calmodulin was mixed with an equimolar amount of bovine serum albumin.

    PubMed

    researchmap

  • Hyperproduction of a bifunctional hybrid protein, metapyrocatechase-protein A, by gene fusion. 国際誌

    E Kobatake, Y Ikariyama, M Aizawa, K Miwa, S Kato

    Journal of biotechnology   16 ( 1-2 )   87 - 96   1990年10月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A hybrid protein between metapyrocatechase and Staphylococcal protein A was produced by recombinant DNA techniques. A plasmid carrying the fusion gene that encodes the hybrid protein was constructed and expressed in E. coli. Over 70% of soluble proteins of the cell extracts was estimated to be the hybrid protein. This fusion protein is about 65,000. Both the IgG-binding activity of protein A and the metapyrocatechase activity were found in the hybrid protein. The optimum pH of metapyrocatechase in the fusion protein was at around 6.5 and Km was 1.3 X 10(-5) M. A simple immuno-enzymometric assay was developed for anti-BSA antibody using the fusion protein.

    PubMed

    researchmap

  • Application of a fusion protein, metapyrocatechase/protein A, to an enzyme immunoassay. 国際誌

    E Kobatake, Y Nishimori, Y Ikariyama, M Aizawa, S Kato

    Analytical biochemistry   186 ( 1 )   14 - 8   1990年4月

     詳細を見る

    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    A fusion protein of metapyrocatechase and protein A was genetically produced for demonstration of effective conjugation of an enzyme with a binding protein employed in enzyme immunoassay. Plasmid pMPRA3, constructed by inserting the protein A gene into a plasmid pMK12 vector derived directly from the structural gene of metapyrocatechase, was expressed in Escherichia coli. The resulting fusion protein was shown to have promising properties for use in enzyme immunoassays due to the specific binding of the protein A moiety to the Fc portion of immunoglobulin G and to the high amplification of enzyme. Bovine serum albumin, a model antigen, was successfully determined in the concentration range from 1 x 10(-3) to 1 x 10(-7) g/ml.

    PubMed

    researchmap

▼全件表示

MISC

  • バイオセンシングを目的としたDNA-タンパク質複合分子作製法の開発

    三重 正和, 小畠 英理

    Chemical sensors   30 ( 1 )   2 - 7   2014年

     詳細を見る

    記述言語:日本語   出版者・発行元:化学センサ研究会  

    CiNii Books

    researchmap

  • 抗血栓性人工血管の開発を目的とした細胞外マトリックスタンパク質の構築

    西岡宣之, 扇澤敏明, 三重正和, 小畠英理

    日本化学会講演予稿集   94th ( 3 )   2014年

     詳細を見る

  • Hydrogel scaffolds composed of genetically synthesized self-assembling peptides for three-dimensional cell culture

    Mie Masayasu, Oomuro Mayu, Kobatake Eiry

    Polymer journal   45 ( 5 )   504 - 508   2013年5月

     詳細を見る

    記述言語:英語   出版者・発行元:Nature Publishing Group  

    CiNii Books

    researchmap

  • 細胞機能を制御するキメラタンパク質の創製 (特集 遺伝子組換え技術とバイオマテリアル)

    三重 正和, 小畠 英理

    バイオマテリアル : 生体材料   31 ( 2 )   109 - 115   2013年4月

     詳細を見る

    記述言語:日本語   出版者・発行元:日本バイオマテリアル学会 ; 2002-  

    CiNii Books

    researchmap

  • バイオ関連分野での基礎-細胞数測定法

    三重 正和, 小畠 英理

    電気化学および工業物理化学 : denki kagaku   76 ( 12 )   924 - 927   2008年12月

     詳細を見る

    記述言語:日本語   出版者・発行元:The Electrochemical Society of Japan  

    DOI: 10.5796/electrochemistry.76.924

    CiNii Books

    researchmap

  • シスプラチン存在下でのHeLa細胞への電位印加によるカスパーゼ活性の促進

    三重 正和, 真鍋 匡史, 小畠 英理

    電気化学および工業物理化学 : denki kagaku   76 ( 8 )   529 - 531   2008年8月

     詳細を見る

  • 生体高分子プローブを利用したRNA検出システム

    遠藤 玉樹, 小畠 英理

    高分子   56 ( 10 )   842 - 842   2007年10月

     詳細を見る

    記述言語:日本語   出版者・発行元:The Society of Polymer Science, Japan  

    DOI: 10.1295/kobunshi.56.842

    CiNii Books

    researchmap

  • 2B14-1 パイロシークエンス技術の効率化に向けた2種酵素固定化バイオナノ磁性粒子の開発(酵素学・酵素工学・タンパク質工学,一般講演)

    下条 明子, 吉野 知子, 鈴木 繁哉, 原田 靖広, 小畠 英理, 神原 秀記, 竹山 春子, 松永 是

    日本生物工学会大会講演要旨集   19   64 - 64   2007年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • Design of a Multifunctional Fusion Protein for Tissue Engineering

    ELLOUMI Imen, KOBAYASHI Rie, FUNABASHI Hisakage, MIE Masayasu, KOBATAKE Eiry

    Peptide science : proceedings of the ... Japanese Peptide Symposium   2006   212 - 213   2007年3月

     詳細を見る

    記述言語:英語  

    CiNii Books

    researchmap

  • 1C-AM5 抗体結合タンパク質のエンジニアリング(抗体酵素および抗体工学の新展開,シンポジウム)

    小畠 英理, 三重 正和

    日本生物工学会大会講演要旨集   18   43 - 43   2006年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • テクノ・トレンド 分子内FRETタンパク質を利用した配列特異的RNA検出法

    遠藤 玉樹, 小畠 英理

    バイオテクノロジージャーナル   6 ( 1 )   81 - 84   2006年1月

     詳細を見る

    記述言語:日本語   出版者・発行元:羊土社  

    CiNii Books

    researchmap

  • 組織工学・再生医療におけるタンパク質材料の利用 (特集1 マテリアルサイエンスで活躍するタンパク質(part2))

    小畠 英理

    バイオインダストリー   22 ( 11 )   22 - 27   2005年11月

     詳細を見る

    記述言語:日本語   出版者・発行元:シーエムシー出版  

    CiNii Books

    researchmap

  • 1C16-3 リボソームディスプレイ法による新規DNA結合タンパク質創出法の開発(酵素学・酵素工学・タンパク質工学,一般講演)

    渭原 寛, 舟橋 久景, 三重 正和, 小畠 英理

    日本生物工学会大会講演要旨集   17   102 - 102   2005年9月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 日本化学会第85春季年会

    小畠 英理

    バイオサイエンスとインダストリー = Bioscience & industry   63 ( 6 )   403 - 403   2005年6月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 電気刺激による神経突起伸長方向制御デバイスの開発

    田中 靖紘, 柳田 保子, 小畠 英理, 初澤 毅

    精密工学会学術講演会講演論文集   2005 ( 0 )   951 - 952   2005年

     詳細を見る

    出版者・発行元:The Japan Society for Precision Engineering  

    脳・神経系の基礎、応用研究のために回路を自由に設計できる神経回路作製法が必要とされている。本研究では細胞を配置する穴と神経突起が伸長する溝、溝内に作製した電極を用いて神経突起伸長方向を制御するデバイス開発することを目的とする。ITOをパターニングした電極上に、SU?8を用いて穴と溝を作製した。このデバイスで細胞を培養し、電気刺激を行うことによって神経突起の伸長方向を一意に決定することに成功した。

    DOI: 10.11522/pscjspe.2005A.0.951.0

    researchmap

  • 2A09-2 新規融合タンパク質による特定配列を有する核酸検出法の開発(酵素学・酵素工学・タンパク質工学,一般講演)

    遠藤 玉樹, 舟橋 久景, 三重 正和, 小畠 英理

    日本生物工学会大会講演要旨集   16   103 - 103   2004年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 2F14-2 神経細胞分化誘導時における未分化多能性細胞除去システムの構築(動物細胞工学・動物組織培養・生体医用工学・人工臓器,一般講演)

    田中 正人, 三重 正和, 舟橋 久景, 小畠 英理

    日本生物工学会大会講演要旨集   16   186 - 186   2004年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 2B16-5 温度制御可能な蛋白質構造体の設計(酵素学・酵素工学・タンパク質工学,一般講演)

    藤田 祥彦, 三重 正和, 舟橋 久景, 小畠 英理

    日本生物工学会大会講演要旨集   16   127 - 127   2004年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 生体高分子の大きさ,形態,局所構造,物性,リガンド相互作用の測定装置 バイオ研究における電気化学測定 (バイオ高性能機器・新技術利用マニュアル) -- (各種解析装置の原理と使用例)

    舟橋 久景, 小畠 英理

    蛋白質核酸酵素   49 ( 11 )   1749 - 1753   2004年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:共立出版  

    CiNii Books

    researchmap

  • The construction of endothelial cellular biosensing system for the control of blood pressure drugs 国際誌

    Kamei, K, Haruyama, T, Mie, M, Yanagida, Y, Aizawa, M, Kobatake, E

    Biosensors & Bioelectronics   19 ( 9 )   1121 - 1124   2004年4月

     詳細を見る

  • Construction and use of an electrochemical NO sensor in a cell-based assessing system

    Kamei, K, Mie, M, Yanagida, Y, Aizawa, M, Kobatake, E

    Sensors and Actuators B-Chemical   99 ( 1 )   106 - 112   2004年4月

     詳細を見る

  • Design of functional protein materials self-assembled on solid-phase surface

    Kobatake, E, Mie, M, Aizawa, M

    Materials Technology   19 ( 1 )   27 - 32   2004年3月

     詳細を見る

    記述言語:英語  

    Web of Science

    researchmap

  • Electrically Modulated Cellular Biodevices (THE SYMPOSIUM OF STUDY ON THE LATEST BIOMOLECULES)

    YANAGIDA Yasuko, MIE Masayasu, KOBATAKE Eiry, AIZAWA Masuo

    International journal of the Society of Materials Engineering for Resources   12 ( 1 )   12 - 15   2004年3月

     詳細を見る

    記述言語:英語   出版者・発行元:秋田大学  

    Living cells contain a whole set of intracellular information networks, including signal transduction pathways that control gene expression, intracellular ion influxes and cellular excitability. Stimulations by extracellular molecular messenger or physical stimuli activates these intracellular information networks, modulate physical functions. According to the special characteristics cells could be used as a part of a biological information network within biodevices. Recently, the studies about bioelectronic access to such biological informations as cellular and biomolecular signals were accelerated. This paper describes new concepts of electrochemical methods using cell-based biodevices.

    CiNii Books

    researchmap

  • バイオセンシング用人工タンパク質の創成

    小畠 英理

    未来材料   3 ( 12 )   2 - 7   2003年12月

     詳細を見る

    記述言語:日本語   出版者・発行元:エヌ・ティー・エス  

    CiNii Books

    researchmap

  • Development of immune cellular biosensing system for assessing chemicals on inducible nitric oxide synthase signaling activator 国際誌

    Kamei, K, Haruyama, T, Mie, M, Yanagida, Y, Aizawa, M, Kobatake, E

    Analytical Biochemistry   320 ( 1 )   75 - 81   2003年9月

     詳細を見る

  • 人工タンパク質材料 (特集1 バイオと化学産業の接点) -- (第2章 バイオマテリアル)

    小畠 英理

    化学装置   45 ( 4 )   63 - 65   2003年4月

     詳細を見る

    記述言語:日本語   出版者・発行元:工業調査会  

    CiNii Books

    researchmap

  • 4.4.バイオテクノロジー・バイオインフォマチクス(4.バイオエンジニアリング)(<特集>機械工学年鑑)

    小畠 英理

    日本機械学會誌   105 ( 1005 )   503 - 503   2002年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:一般社団法人日本機械学会  

    CiNii Books

    researchmap

  • 東京工業大学 大学院生命理工学研究科 生命情報専攻 生命情報工学講座 情報生命工学分野

    小畠 英理

    紙パ技協誌   56 ( 8 )   1180 - 1181   2002年8月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 細胞バイオセンシングシステムを用いた血圧調節剤の評価

    亀井謙一郎, 三重正和, 柳田保子, 小畠英理, 相沢益男

    日本化学会講演予稿集   81st ( 2 )   2002年

     詳細を見る

  • 多機能タンパク質の創製とその応用

    小畠 英理

    酵素工学研究会講演会講演要旨集   46   12 - 14   2001年10月

     詳細を見る

    記述言語:日本語   出版者・発行元:酵素工学研究会  

    researchmap

  • タンパク質分子を素材としたインテリジェント材料の設計

    小畠 英理

    高分子   50 ( 7 )   458 - 458   2001年7月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人 高分子学会  

    DOI: 10.1295/kobunshi.50.458

    CiNii Books

    researchmap

  • 神経作用物質評価のための細胞バイオセンシングシステムの構築

    亀井謙一郎, 春山哲也, 柳田保子, 小畠英理, 相沢益男

    電気化学会大会講演要旨集   68th   2001年

     詳細を見る

  • 薬物刺激に応答する細胞バイオセンシングシステムの構築

    亀井謙一郎, 春山哲也, 柳田保子, 小畠英理, 相沢益男

    インテリジェント材料シンポジウム講演要旨集   10th   2001年

     詳細を見る

  • 神経作用物質評価のための細胞バイオセンシングシステムの構築

    亀井謙一郎, 春山哲也, 柳田保子, 小畠英理, 相沢益男

    Chemical Sensors   17 ( Supplement A )   2001年

     詳細を見る

  • 829 温度応答性抗体結合タンパク質の設計及び遺伝子工学的合成

    杉原 努, 柳田 保子, 小畠 英理, 相澤 益男

    日本生物工学会大会講演要旨集   12   193 - 193   2000年7月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 電気化学NO検出を基盤とした細胞バイオセンシングシステム

    亀井 謙一郎, 春山 哲也, 小畠 英理

    Proceedings of the Chemical Sensor Symposium   30   133 - 135   2000年4月

     詳細を見る

    記述言語:日本語   出版者・発行元:電気化学会化学センサ研究会  

    researchmap

  • 特殊環境耐性タンパク質の設計・合成 (特集 バイオハイブリッド--21世紀のニーズとシーズ)

    相澤 益男, 小畠 英理

    バイオインダストリ-   16 ( 10 )   48 - 51   1999年10月

     詳細を見る

    記述言語:日本語   出版者・発行元:シ-エムシ-  

    CiNii Books

    researchmap

  • 脂肪細胞分化に依存したBMP-2発現系による骨芽細胞分化制御

    三重 正和, 大串 始, 柳田 保子, 春山 哲也, 小畠 英理, 玉井 進, 相澤 益男

    日本整形外科學會雜誌 = The Journal of the Japanese Orthopaedic Association   73 ( 8 )   S1770   1999年8月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 738 脂質修飾抗体結合タンパク質を用いた固体表面への抗体分子の配向固定

    重松 秀樹, 柳田 保子, 春山 哲也, 小畠 英理, 相澤 益男

    日本生物工学会大会講演要旨集   11   151 - 151   1999年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 細胞の増殖,分化,遺伝子発現の電気刺激による制御

    相澤 益男, 小山 純弘, 木村 経世, HARUYAMA Tetsuya, YANAGIDA Yasuko, KOBATAKE Eiry

    電気化学および工業物理化学 : denki kagaku   67 ( 2 )   118 - 125   1999年2月

     詳細を見る

    記述言語:英語   出版者・発行元:電気化学会  

    CiNii Books

    researchmap

  • 熱処理シトクロムCあるいはラジカルスカベンジャーを用いた2種類の in situ NO センサの構築

    春山 哲也, 亀井 謙一郎, 小畠 英理, 相澤 益男

    電気学会研究会資料. CS, 化学センサシステム研究会   1998 ( 48 )   37 - 42   1998年11月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 1120 新規耐熱性細胞接着タンパク質の構築

    小畠 英理, 小野田 航二, 柳田 保子, 春山 哲也, 相澤 益男

    日本生物工学会大会講演要旨集   10   276 - 276   1998年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 1124 遺伝子工学的手法を用いた脂質修飾抗体結合タンパク質の創製

    重松 秀樹, 柳田 保子, 春山 哲也, 小畠 英理, 相澤 益男

    日本生物工学会大会講演要旨集   10   279 - 279   1998年8月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 日本化学会第74春季年会

    小畠 英理

    バイオサイエンスとインダストリー = Bioscience & industry   56 ( 6 )   38 - 38   1998年6月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • ラジカルスカベンジャーを用いたin situ NOセンサの構築

    亀井謙一郎, 春山哲也, 柳田保子, 小畠英理, 相沢益男

    電気化学会大会講演要旨集   65th   1998年

     詳細を見る

  • 606 脂質修飾抗体を用いて作製したイムノリポソームによるQCMセンシングシステム

    尹 奎植, 柳田 保子, 春山 哲也, 小畠 英理, 相澤 益男, Keinanen Kari

    日本生物工学会大会講演要旨集   9   219 - 219   1997年9月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 電気刺激による骨髄幹細胞の骨芽細胞への分化促進

    三重 正和, 大串 始, 春山 哲也, 小畠 英理, 玉井 進, 相澤 益男

    日本整形外科學會雜誌 = The Journal of the Japanese Orthopaedic Association   71 ( 8 )   S1519   1997年8月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 第1回日本化学会バイオテクノロジー部会

    小畠 英理

    バイオサイエンスとインダストリー = Bioscience & industry   55 ( 2 )   38 - 39   1997年2月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 分子集積によるバイオセンサの構築

    春山 哲也, 小畠 英理, 相澤 益男

    電気学会研究会資料. CS, 化学センサシステム研究会   1996 ( 11 )   179 - 188   1996年11月

     詳細を見る

    記述言語:日本語  

    CiNii Books

    researchmap

  • 756 部位特異的脂質修飾抗体によるイムノリポソームの作製と免疫測定への応用

    小畠 英理, 笹倉 裕行, 春山 哲也, 相澤 益男, Laukkanen Marja-Leena, Keinanen Kari

    日本生物工学会大会講演要旨集   8   228 - 228   1996年9月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 757 遺伝子工学的に作製した抗体結合タンパク質の金基板への分子集積

    菅野 壮平, 柳田 保子, 春山 哲也, 小畠 英理, 相澤 益男

    日本生物工学会大会講演要旨集   8   229 - 229   1996年9月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 343 電気刺激によるアストログリア細胞のNGF発現機構

    小山 純弘, 春山 哲也, 柳田 保子, 小畠 英理, 相澤 益男

    日本生物工学会大会講演要旨集   8   82 - 82   1996年9月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 導電性高分子マトリックスを反応場とするペプチド合成の電位制御 : 生物化学工学

    Khan G.F, 春山 哲也, 小畠 英理, 相澤 益男

    日本農藝化學會誌   70 ( 0 )   130 - 130   1996年3月

     詳細を見る

    記述言語:日本語   出版者・発行元:社団法人日本農芸化学会  

    CiNii Books

    researchmap

  • 577 電気刺激によるアストログリア細胞のNGF発現誘導

    小山 純弘, 春山 哲也, 小畠 英理, 相澤 益男

    日本生物工学会大会講演要旨集   7   201 - 201   1995年9月

     詳細を見る

    記述言語:日本語   出版者・発行元:公益社団法人日本生物工学会  

    CiNii Books

    researchmap

  • 固定化mRNAによる生体外タンパク質生産

    小畠 英理, 碇山 義人, 相澤 益男

    生物物理   32 ( 2 )   98 - 100   1992年3月

     詳細を見る

    記述言語:日本語   出版者・発行元:一般社団法人日本生物物理学会  

    DOI: 10.2142/biophys.32.98

    CiNii Books

    researchmap

▼全件表示

共同研究・競争的資金等の研究課題

  • 自己組織化タンパク質による超高感度バイオセンシングシステムの開発

    研究課題/領域番号:08069553  2008年

    科学技術振興機構  産学が連携した研究開発成果の展開/研究成果展開事業/地域事業/地域イノベーション創出総合支援事業/シーズ発掘試験

    小畠 英理

      詳細を見る

    疎水性が高く、かつ自己組織化能を有する抗体結合タンパク質を設計・合成し、これを利用した超高感度バイオセンシングシステムを構築することを目的とする。基本骨格となる疎水性構造を有するアミノ酸配列ドメインは、疎水性基板表面との強固な集積を可能とし、自己組織化ドメイン及び抗体結合ドメインは、基板へのタンパク質の配向を制御し、高密度な抗体集積を可能とするものである。これらのドメインが連結した新規タンパク質を遺伝子工学的に合成し、基板上に集積してその性能を評価する。

    researchmap